RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 FGFBP3Q8TAT2 258 aa8.98□□□□□ -0.97
NEK9-205ENST00000555405 OPALINQ96PE5 141 aa8.98□□□□□ -0.97
NEK9-205ENST00000555405 C1orf198Q9H425 327 aa8.98□□□□□ -0.97
NEK9-205ENST00000555405 TRIM36Q9NQ86 728 aa8.98□□□□□ -0.97
NEK9-205ENST00000555405 FKBP14Q9NWM8 211 aa8.98□□□□□ -0.97
NEK9-205ENST00000555405 PROCRQ9UNN8 238 aa8.98□□□□□ -0.97
NEK9-205ENST00000555405 TMEM14AQ9Y6G1 99 aa8.98□□□□□ -0.97
NEK9-205ENST00000555405 ADGRG4Q8IZF6 3080 aa8.98□□□□□ -0.97
NEK9-205ENST00000555405 PLCE1Q9P212 2302 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 CFAP46Q8IYW2 2715 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 CENPBD1B2RD01 187 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 ZNF32P17041 273 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 RIDAP52758 137 aaKnown RBP8.97□□□□□ -0.97
NEK9-205ENST00000555405 FOXB2Q5VYV0 432 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
NEK9-205ENST00000555405 NAA40Q86UY6 237 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 FAM57AQ8TBR7 257 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 PELI1Q96FA3 418 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 GMPPAQ96IJ6 420 aaPredicted RBP8.97□□□□□ -0.97
NEK9-205ENST00000555405 RNF122Q9H9V4 155 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 MRM2Q9UI43 246 aaKnown RBP8.97□□□□□ -0.97
NEK9-205ENST00000555405 TOXO94900 526 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 AGFG2O95081 481 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 GABRA1P14867 456 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 ALDH3B2P48448 385 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 RGS6P49758 472 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 POU4F3Q15319 338 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 FAM27D1Q5T7N8 215 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 C22orf42Q6IC83 251 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 VASH1Q7L8A9 365 aaPredicted RBP8.97□□□□□ -0.97
NEK9-205ENST00000555405 ZNF367Q7RTV3 350 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 SKA3Q8IX90 412 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 WNT2BQ93097 391 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 MRPL48Q96GC5 212 aaKnown RBP8.97□□□□□ -0.97
NEK9-205ENST00000555405 CLCF1Q9UBD9 225 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 CAB39Q9Y376 341 aaPredicted RBP8.97□□□□□ -0.97
NEK9-205ENST00000555405 FAM215AQ9Y5M1 114 aa8.97□□□□□ -0.97
NEK9-205ENST00000555405 LOC102725191A0A1B0GVB3 256 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 TMEM269A0A1B0GVZ9 245 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 OR14I1A6ND48 311 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 METTL15A6NJ78 407 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 CCRL2O00421 344 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 CCL21O00585 134 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 DVL2O14641 736 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 TACSTD2P09758 323 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 PSMA1P25786 263 aaKnown RBP8.96□□□□□ -0.97
NEK9-205ENST00000555405 KIR2DL2P43627 348 aaPredicted RBP8.96□□□□□ -0.97
NEK9-205ENST00000555405 HTR5AP47898 357 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 BLVRAP53004 296 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 SFRP5Q5T4F7 317 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 RTL6Q6ICC9 239 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 CDC20BQ86Y33 519 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 SLC22A24Q8N4F4 322 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 KDF1Q8NAX2 398 aaPredicted RBP8.96□□□□□ -0.97
NEK9-205ENST00000555405 GHSRQ92847 366 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 C12orf43Q96C57 262 aaKnown RBP8.96□□□□□ -0.97
NEK9-205ENST00000555405 MS4A3Q96HJ5 214 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 MAP6Q96JE9 813 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 COG8Q96MW5 612 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 NELFAQ9H3P2 528 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 GALNT8Q9NY28 637 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 RCE1Q9Y256 329 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 LHFPL6Q9Y693 200 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 A0A1W2PPW3 197 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 HOXC12P31275 282 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 UBE2NP61088 152 aaKnown RBP8.96□□□□□ -0.97
NEK9-205ENST00000555405 FBXW9Q5XUX1 488 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 FAM57BQ71RH2 274 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 OR13F1Q8NGS4 319 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 FCGR1BQ92637 280 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 FBXO17Q96EF6 278 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 NKX3-1Q99801 234 aaPredicted RBP8.96□□□□□ -0.97
NEK9-205ENST00000555405 SLC24A3Q9HC58 644 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 HAO2Q9NYQ3 351 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 RSL24D1Q9UHA3 163 aaKnown RBP8.96□□□□□ -0.97
NEK9-205ENST00000555405 ZNF175Q9Y473 711 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 LRP12Q9Y561 859 aa8.96□□□□□ -0.97
NEK9-205ENST00000555405 LRRK2Q5S007 2527 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 CHD6Q8TD26 2715 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 A0A1B0GVC2 190 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 TMEM8BA6NDV4 472 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 FAM90A27PA6NNH2 459 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 LOC110117498-PIK3R3F6TDL0 507 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 IGHA1P01876 353 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 APEX1P27695 318 aaKnown RBP8.96□□□□□ -0.98
NEK9-205ENST00000555405 SERPINB10P48595 397 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 SEM1Q6ZVN7 128 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 TMEM54Q969K7 222 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 CENPOQ9BU64 300 aa8.96□□□□□ -0.98
NEK9-205ENST00000555405 FOXD3Q9UJU5 478 aaPredicted RBP8.96□□□□□ -0.98
NEK9-205ENST00000555405 SGCEO43556 437 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 GDI2P50395 445 aaKnown RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 IDH3GP51553 393 aaPredicted RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 RAB1AP62820 205 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 IRF3Q14653 427 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 SSX1Q16384 188 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 SYT6Q5T7P8 510 aaPredicted RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 NSUN5P2Q63ZY6 315 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 PHC2Q8IXK0 858 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms