RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CCDC92Q53HC0 331 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 PABPC1L2AQ5JQF8 200 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 OTPQ5XKR4 325 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 SHFQ7M4L6 423 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 ALDH16A1Q8IZ83 802 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF295-AS1Q8N0V1 137 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 CPEB3Q8NE35 698 aaKnown RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 C14orf79Q96F83 325 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 TMEM204Q9BSN7 226 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 YIPF3Q9GZM5 350 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 WNT5BQ9H1J7 359 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 C1orf198Q9H425 327 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 ESRP2Q9H6T0 727 aaKnown RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 PNRC2Q9NPJ4 139 aaKnown RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 MRPS18AQ9NVS2 196 aaKnown RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 CLN6Q9NWW5 311 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 DNAJC27Q9NZQ0 273 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 AASSQ9UDR5 926 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 RAB26Q9ULW5 256 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 USP9YO00507 2555 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 A6NNC1 897 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 RER1O15258 196 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 SGCEO43556 437 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 SYNGR3O43761 229 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 RAB36O95755 333 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 SBK2P0C263 348 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 CECR9P0C854 216 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 PSKH1P11801 424 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF35P13682 527 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ALOX5APP20292 161 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF83P51522 516 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 IDH3GP51553 393 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-219ENST00000555323 IL5RAQ01344 420 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 NAAAQ02083 359 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 POU4F2Q12837 409 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 CDK5R2Q13319 367 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 RAB39AQ14964 217 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 C6orf52Q5T4I8 152 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 VASH1Q7L8A9 365 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-219ENST00000555323 SLC16A9Q7RTY1 509 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 DPY19L4Q7Z388 723 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 THAP5Q7Z6K1 395 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ERI1Q8IV48 349 aaKnown RBP11.01□□□□□ -0.65
SYNE2-219ENST00000555323 C8orf59Q8N0T1 100 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 OR2AJ1Q8NGZ0 328 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 OTOSQ8NHW6 89 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ST7LQ8TDW4 575 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 PLPPR2Q96GM1 343 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 MAP6Q96JE9 813 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 RADILQ96JH8 1075 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 POM121L2Q96KW2 1035 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 MNTQ99583 582 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ANKRD60Q9BZ19 345 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ADGRL4Q9HBW9 690 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 ATPIF1Q9UII2 106 aa11.01□□□□□ -0.65
SYNE2-219ENST00000555323 GDF2Q9UK05 429 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-219ENST00000555323 GCN1Q92616 2671 aaKnown RBP11.01□□□□□ -0.65
SYNE2-219ENST00000555323 IQCMA0A1B0GVH7 501 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 OR6C6A6NF89 314 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 J3QRE1 110 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 M0R1B8 84 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 SELENOFO60613 162 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 CTAG2O75638 210 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 CELA3BP08861 270 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 MYF6P23409 242 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 STOMP27105 288 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 RPS27P42677 84 aaKnown RBP11□□□□□ -0.65
SYNE2-219ENST00000555323 MTNR1AP48039 350 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 BSPH1Q075Z2 132 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 RSPO1Q2MKA7 263 aaPredicted RBP11□□□□□ -0.65
SYNE2-219ENST00000555323 KRTAP27-1Q3LI81 207 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 ELFN2Q5R3F8 820 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 LAIR2Q6ISS4 152 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 ALKBH2Q6NS38 261 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF774Q6NX45 483 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 CORO6Q6QEF8 472 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 CFAP77Q6ZQR2 320 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 MYPOPQ86VE0 399 aaPredicted RBP11□□□□□ -0.65
SYNE2-219ENST00000555323 CDC20BQ86Y33 519 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 LINC00346Q8IVM7 164 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 AKR7LQ8NHP1 331 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF184Q99676 751 aaPredicted RBP11□□□□□ -0.65
SYNE2-219ENST00000555323 COQ7Q99807 217 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 DDX28Q9NUL7 540 aaKnown RBP11□□□□□ -0.65
SYNE2-219ENST00000555323 PLEK2Q9NYT0 353 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 EXOGQ9Y2C4 368 aaKnown RBP11□□□□□ -0.65
SYNE2-219ENST00000555323 POLR1DQ9Y2S0 133 aa11□□□□□ -0.65
SYNE2-219ENST00000555323 ANKHD1Q8IWZ3 2542 aaKnown RBP11□□□□□ -0.65
SYNE2-219ENST00000555323 LOC100509620A0A075B734 347 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 DENRO43583 198 aaKnown RBP10.99□□□□□ -0.65
SYNE2-219ENST00000555323 ICMTO60725 284 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 CRYAAP02489 173 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 SPARCP09486 303 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 OR2T7P0C7T2 308 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 OTX1P32242 354 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-219ENST00000555323 SLC15A1P46059 708 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 NUDT6P53370 316 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms