RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 EVX1P49640 407 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 TAGLNQ01995 201 aaKnown RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 CDC20Q12834 499 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 DEGS2Q6QHC5 323 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 CFAP77Q6ZQR2 320 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 FAM220AQ7Z4H9 259 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 AKAP14Q86UN6 197 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 LYPD6Q86Y78 171 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 THEM6Q8WUY1 208 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 UTP23Q9BRU9 249 aaKnown RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 ZNF552Q9H707 407 aaPredicted RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 ELOVL3Q9HB03 270 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 FBXL3Q9UKT7 428 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 FLVCR1Q9Y5Y0 555 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ARHGAP21Q5T5U3 1957 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 BSNQ9UPA5 3926 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ZNF292O60281 2723 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 GPR171O14626 319 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 CEACAM4O75871 244 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 SP1P08047 785 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 SPARCP09486 303 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 EPXP11678 715 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 ZNF708P17019 499 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 IGFBP3P17936 291 aaPredicted RBP7.88□□□□□ -1.15
TDP1-210ENST00000554976 SRMP19623 302 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 RASGEF1BQ0VAM2 473 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 CLN3Q13286 438 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 BAK1Q16611 211 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 Q499Y3 187 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 ABHD17BQ5VST6 288 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 METAP1DQ6UB28 335 aaPredicted RBP7.88□□□□□ -1.15
TDP1-210ENST00000554976 ESPNLQ6ZVH7 1005 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 RHOUQ7L0Q8 258 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 ASCL5Q7RTU5 278 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 DCXRQ7Z4W1 244 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 OR5AK2Q8NH90 309 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 ORAI1Q96D31 301 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 PLA2G3Q9NZ20 509 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 MED13Q9UHV7 2174 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 BOKQ9UMX3 212 aaPredicted RBP7.88□□□□□ -1.15
TDP1-210ENST00000554976 R4GMQ9 66 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 A0A0C4DFX4 3053 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 TTLL8A6PVC2 850 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 LINC01387J3KSC0 135 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 CYTIPO60759 359 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 ATF1P18846 271 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 ITGA3P26006 1051 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 CLDN17P56750 224 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 CLRN1P58418 232 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 KRTAP27-1Q3LI81 207 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 DDI2Q5TDH0 399 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 FAM122CQ6P4D5 195 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 LINGO2Q7L985 606 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 LINC00346Q8IVM7 164 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 OR2V1Q8NHB1 315 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 OR14L1PQ8NHC6 308 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 CHAC2Q8WUX2 184 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 TRIM63Q969Q1 353 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 PPP1R14AQ96A00 147 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 POLE4Q9NR33 117 aa7.88□□□□□ -1.15
TDP1-210ENST00000554976 IGKV3D-15A0A087WSY6 115 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 OR5H15A6NDH6 313 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 ACOD1A6NK06 481 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 TMEM127O75204 238 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 RPP14O95059 124 aaKnown RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 IGLV3-1P01715 115 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 EIF4EP06730 217 aaKnown RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 ZNF43P17038 809 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 PRKACAP17612 351 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 ELK1P19419 428 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 RAB3BP20337 219 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 ENDOGQ14249 297 aaKnown RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 TMEM225Q6GV28 225 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 XKRXQ6PP77 449 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 PRSS45Q7RTY3 260 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 SYT9Q86SS6 491 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 GPAT4Q86UL3 456 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 VASH2Q86V25 355 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 ASCC1Q8N9N2 400 aaKnown RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 ZFP62Q8NB50 900 aaPredicted RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 NSMAFQ92636 917 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 HAS2Q92819 552 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 KCNJ15Q99712 375 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 NAA11Q9BSU3 229 aaPredicted RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 NEK6Q9HC98 313 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 CYSLTR2Q9NS75 346 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 GLTPQ9NZD2 209 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 PCDHGA9Q9Y5G4 932 aaKnown RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 TRAV8-7A0A075B6U6 113 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 TBX1O43435 398 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 SLC19A2O60779 497 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 ARL6IP5O75915 188 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 QDPRP09417 244 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 CSF3P09919 207 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 MYL9P24844 172 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 GDF1P27539 372 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 RBMS1P29558 406 aaKnown RBP7.87□□□□□ -1.15
TDP1-210ENST00000554976 CDAP32320 146 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 SELENOPP49908 381 aa7.87□□□□□ -1.15
TDP1-210ENST00000554976 HSD17B12Q53GQ0 312 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms