RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PRODH2	Q9UF12	536 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZDHHC2	Q9UIJ5	367 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	CLEC4A	Q9UMR7	237 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	CFL2	Q9Y281	166 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	UTP11	Q9Y3A2	253 aa	Known RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	PYGO1	Q9Y3Y4	419 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	TIMM22	Q9Y584	194 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	FBN3	Q75N90	2809 aa		4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	NSD1	Q96L73	2696 aa	Predicted RBP	4.36	□□□□□ -1.71
PSMC6-208	ENST00000554956	ROS1	P08922	2347 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	ANK3	Q12955	4377 aa	Known RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	TLN2	Q9Y4G6	2542 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	FBN1	P35555	2871 aa	Known RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	UPK1A	O00322	258 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	CTDSPL	O15194	276 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	EMC8	O43402	210 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	CDH16	O75309	829 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	PSMG1	O95456	288 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	OTC	P00480	354 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	IGLV1-44	P01699	117 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	POU2F1	P14859	743 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	SHC1	P29353	583 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	EVI2B	P34910	448 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	NKX2-1	P43699	371 aa	Predicted RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	DSCR4	P56555	118 aa	Predicted RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	TRA2B	P62995	288 aa	Known RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	CAV1	Q03135	178 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	P2RY6	Q15077	328 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	PON3	Q15166	354 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	TSC22D1	Q15714	1073 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	BCL2A1	Q16548	175 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	EXOC3L2	Q2M3D2	409 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	CTU2	Q2VPK5	515 aa	Known RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZFP69	Q49AA0	526 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZNF678	Q5SXM1	525 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZC2HC1B	Q5TFG8	222 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	RAET1L	Q5VY80	246 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	PODNL1	Q6PEZ8	512 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	TMEM107	Q6UX40	140 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	SYT10	Q6XYQ8	523 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	STAC2	Q6ZMT1	411 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	SLC16A9	Q7RTY1	509 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZNF554	Q86TJ5	538 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	LRRC75A-AS1	Q8N1F1	130 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	NOA1	Q8NC60	698 aa	Known RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR4K17	Q8NGC6	315 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR4C3	Q8NH37	302 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	RAB3IL1	Q8TBN0	382 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	HSD17B8	Q92506	261 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	PIK3R3	Q92569	461 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	PROX1	Q92786	737 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	CCL19	Q99731	98 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	MRPL57	Q9BQC6	102 aa	Known RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	MED18	Q9BUE0	208 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	GLIPR2	Q9H4G4	154 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	DKKL1	Q9UK85	242 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	EIF3L	Q9Y262	564 aa	Known RBP	4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZNF780B	Q9Y6R6	833 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	USF3	Q68DE3	2245 aa		4.35	□□□□□ -1.71
PSMC6-208	ENST00000554956	FREM3	P0C091	2139 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	IGLV3-32	A0A0A0MS00	114 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956		A0A0J9YW62	118 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	C13orf42	A0A1B0GVH6	325 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	GNG14	A0A1W2PPG7	69 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956		A0A1W2PPW3	197 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	C5orf51	A6NDU8	294 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	ARHGEF9	O43307	516 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	EFNA2	O43921	213 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	SMIM24	O75264	130 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	SUPT7L	O94864	414 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	UTS2	O95399	124 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	CRH	P06850	196 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	SOD3	P08294	240 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	ANXA4	P09525	319 aa	Predicted RBP	4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	SMIM18	P0DKX4	95 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZNF26	P17031	533 aa	Predicted RBP	4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	CCNA2	P20248	432 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	EFNA1	P20827	205 aa	Predicted RBP	4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	TBXA2R	P21731	343 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	EDNRA	P25101	427 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	IL12B	P29460	328 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	GABRA3	P34903	492 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	MNDA	P41218	407 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	MAP3K8	P41279	467 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	IER3	P46695	156 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	RFX3	P48380	749 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	VEGFC	P49767	419 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	NCBP2	P52298	156 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	DIO3	P55073	304 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	UCP2	P55851	309 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	MTCP1	P56278	107 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	HTD2	P86397	168 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	VEZF1	Q14119	521 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	ODF4	Q2M2E3	257 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	IFI44L	Q53G44	452 aa		4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.34	□□□□□ -1.71
PSMC6-208	ENST00000554956	TEX35	Q5T0J7	233 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms