RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CTNSO60931 367 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 KHDRBS3O75525 346 aaKnown RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 B3GALNT1O75752 331 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 TFP02787 698 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 CD14P08571 375 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 MRPL3P09001 348 aaKnown RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 SNRPBP14678 240 aaKnown RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 HIST1H1CP16403 213 aaKnown RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 AGAP20933 346 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 RPL4P36578 427 aaKnown RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 SLC6A8P48029 635 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 TDGF1P3P51864 188 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 PUDPQ08623 228 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 SERTAD2Q14140 314 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 RBMS2Q15434 407 aaKnown RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 LGALSLQ3ZCW2 172 aaPredicted RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 TP53I3Q53FA7 332 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 TMEM69Q5SWH9 247 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 ZNF626Q68DY1 528 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 ZNF324BQ6AW86 544 aaPredicted RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 RHBDD2Q6NTF9 364 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 IGFL2Q6UWQ7 119 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 IL20RBQ6UXL0 311 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 COX15Q7KZN9 410 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 KRT77Q7Z794 578 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 JAZF1Q86VZ6 243 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 ZNF227Q86WZ6 799 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 TMEM151BQ8IW70 566 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 BCORP1Q8N888 145 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 DNAAF1Q8NEP3 725 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 OR11G2Q8NGC1 345 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 OR2T35Q8NGX2 323 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 OR2T4Q8NH00 348 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 OR51Q1Q8NH59 317 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 CCDC107Q8WV48 283 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 ASB17Q8WXJ9 295 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 DACT3Q96B18 629 aaPredicted RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 PEX11GQ96HA9 241 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 VSTM2LQ96N03 204 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 SPOCK3Q9BQ16 436 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 ENKD1Q9H0I2 346 aa9.97□□□□□ -0.81
SRP54-205ENST00000554803 MYOZ1Q9NP98 299 aaPredicted RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 GPN3Q9UHW5 284 aaPredicted RBP9.97□□□□□ -0.81
SRP54-205ENST00000554803 A0A1B0GX78 115 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 SERINC4A6NH21 518 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 XRCC3O43542 346 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 LDB3O75112 727 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 ZNF254O75437 659 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 KLF7O75840 302 aaPredicted RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 AQP8O94778 261 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 CSTAP01040 98 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 UBL4AP11441 157 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 FUT1P19526 365 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 SDHAP31040 664 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 PTGER1P34995 402 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 CD96P40200 585 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 FOXL2P58012 376 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 ACTBP60709 375 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 ACTG1P63261 375 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 DCDP81605 110 aaKnown RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 PSG6Q00889 435 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 ID2Q02363 134 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 ALKBH1Q13686 389 aaKnown RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 EXOSC2Q13868 293 aaKnown RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 FAM27D1Q5T7N8 215 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 YOD1Q5VVQ6 348 aaPredicted RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 RPUSD3Q6P087 351 aaKnown RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 LPCAT3Q6P1A2 487 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 FIGNL1Q6PIW4 674 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 C5orf46Q6UWT4 87 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 RFPL4BQ6ZWI9 263 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 COMMD7Q86VX2 200 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 ACBD4Q8NC06 268 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 OR52R1Q8NGF1 315 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 OR5AK2Q8NH90 309 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 ANKRD9Q96BM1 317 aaPredicted RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 ZMYND19Q96E35 227 aaPredicted RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 KLHL15Q96M94 604 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 OR14A2Q96R54 314 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 PPA2Q9H2U2 334 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 GSX1Q9H4S2 264 aaPredicted RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 SCPEP1Q9HB40 452 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 NOX3Q9HBY0 568 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 NOX4Q9NPH5 578 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 SLC22A11Q9NSA0 550 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 MED11Q9P086 117 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 FOXJ3Q9UPW0 622 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 RCE1Q9Y256 329 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 MRPS7Q9Y2R9 242 aaKnown RBP9.96□□□□□ -0.82
SRP54-205ENST00000554803 IER3IP1Q9Y5U9 82 aa9.96□□□□□ -0.82
SRP54-205ENST00000554803 TRBV5-7A0A0A0MS05 114 aa9.95□□□□□ -0.82
SRP54-205ENST00000554803 CENPVL1A0A0U1RR11 272 aa9.95□□□□□ -0.82
SRP54-205ENST00000554803 A0A1W2PPL8 197 aa9.95□□□□□ -0.82
SRP54-205ENST00000554803 PLSCR5A0PG75 271 aa9.95□□□□□ -0.82
SRP54-205ENST00000554803 ZC3H12DA2A288 527 aaKnown RBP9.95□□□□□ -0.82
SRP54-205ENST00000554803 OR2W5A6NFC9 320 aa9.95□□□□□ -0.82
SRP54-205ENST00000554803 ZSCAN5BA6NJL1 495 aa9.95□□□□□ -0.82
SRP54-205ENST00000554803 H0YIG0 161 aa9.95□□□□□ -0.82
SRP54-205ENST00000554803 TGFBR3LH3BV60 316 aa9.95□□□□□ -0.82
SRP54-205ENST00000554803 H7C417 338 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms