RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 KYAT1Q16773 422 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 SLC5A12Q1EHB4 618 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 TIGITQ495A1 244 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 RNF212Q495C1 297 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 RWDD4Q6NW29 188 aaKnown RBP1.09□□□□□ -2.23
PRPF39-208ENST00000554785 PMF1Q6P1K2 205 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 FAM173BQ6P4H8 233 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 TFAP2EQ6VUC0 442 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 DNM1P46Q6ZS02 220 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 FRA10AC1Q70Z53 315 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 MOB1BQ7L9L4 216 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF720Q7Z2F6 126 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 TRPM8Q7Z2W7 1104 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 C16orf62Q7Z3J2 963 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 MTURNQ8N3F0 131 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 C11orf42Q8N5U0 333 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 CLDN19Q8N6F1 224 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 RPL3LQ92901 407 aaKnown RBP1.09□□□□□ -2.23
PRPF39-208ENST00000554785 TMEM159Q96B96 161 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 C8orf44Q96CB5 159 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 HAVCR1Q96D42 359 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 MS4A14Q96JA4 679 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 NOL4LQ96MY1 436 aaPredicted RBP1.09□□□□□ -2.23
PRPF39-208ENST00000554785 ALG12Q9BV10 488 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 RAB33BQ9H082 229 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 Q9H3A6 140 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF702PQ9H963 129 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 ELOVL3Q9HB03 270 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 CSNK1G1Q9HCP0 422 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 FANCFQ9NPI8 374 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 NANSQ9NR45 359 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 DHCR7Q9UBM7 475 aaKnown RBP1.09□□□□□ -2.23
PRPF39-208ENST00000554785 SEC14L3Q9UDX4 400 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 RIMS3Q9UJD0 308 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF221Q9UK13 617 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 NPIPA1Q9UND3 350 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 SNX6Q9UNH7 406 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 PSMD13Q9UNM6 376 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 MAD1L1Q9Y6D9 718 aa1.09□□□□□ -2.23
PRPF39-208ENST00000554785 PHF3Q92576 2039 aaKnown RBP1.09□□□□□ -2.23
PRPF39-208ENST00000554785 NCKAP5O14513 1909 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 ARHGAP21Q5T5U3 1957 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 IGHV2-70DA0A0C4DH43 119 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 ZFP92A6NM28 416 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM110-MUSTN1A8MSY1 372 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 NPIPA7E9PJI5 369 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 SULT2B1O00204 365 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 TPST2O60704 377 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 LYPLA1O75608 230 aaPredicted RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 UGT2B17O75795 530 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 CA1P00915 261 aaPredicted RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 IGHV3-23P01764 117 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 HLA-DRAP01903 254 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 SEMG1P04279 462 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 HSPB1P04792 205 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 KLK3P07288 261 aaPredicted RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 H2BFMP0C1H6 154 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 NPIPA8P0DM63 369 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 CPN1P15169 458 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 PSMB1P20618 241 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 UQCRC2P22695 453 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 GCKP35557 465 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 HPCAL1P37235 193 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 CA7P43166 264 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 KIR2DS2P43631 304 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 RGRP47804 291 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 RGS4P49798 205 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 TDGF1P3P51864 188 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 DIO3P55073 304 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 DAOAP59103 153 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 RHOAP61586 193 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 CBX1P83916 185 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 BST2Q10589 180 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 SYCP1Q15431 976 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 AANATQ16613 207 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 LRRC36Q1X8D7 754 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 GGTA1PQ4G0N0 100 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 TFDP3Q5H9I0 405 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 C9orf129Q5T035 196 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 LIPNQ5VXI9 398 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 PYHIN1Q6K0P9 492 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 FAM71F2Q6NXP2 309 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 RFLNAQ6ZTI6 216 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM110Q86TL2 294 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 SLC38A6Q8IZM9 456 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 C14orf178Q8N769 122 aaPredicted RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 ARIH2OSQ8N7S6 290 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 STXBP6Q8NFX7 210 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 OR2AP1Q8NGE2 309 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 OR10A7Q8NGE5 316 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 OR51G2Q8NGK0 314 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 CTNNBL1Q8WYA6 563 aaPredicted RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM158Q8WZ71 300 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 N4BP2L2Q92802 583 aaPredicted RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 FGGYQ96C11 551 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 NUS1Q96E22 293 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 CELF6Q96J87 481 aaKnown RBP1.09□□□□□ -2.24
PRPF39-208ENST00000554785 C7orf34Q96L11 122 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 MAGEB18Q96M61 343 aa1.09□□□□□ -2.24
PRPF39-208ENST00000554785 TTC25Q96NG3 672 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms