RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CD14P08571 375 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 TNFSF4P23510 183 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 HILS1P60008 231 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 ACTG1P63261 375 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 TNFAIP6P98066 277 aaPredicted RBP15.9■□□□□ 0.14
CPSF2-203ENST00000554290 SCRN3Q0VDG4 424 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 MTX3Q5HYI7 312 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 TMPRSS11FQ6ZWK6 438 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 CBLL1Q75N03 491 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 ST7LQ8TDW4 575 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 ANKRD19PQ9H560 264 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 MSL2Q9HCI7 577 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 EMC7Q9NPA0 242 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 TBCCD1Q9NVR7 557 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 TMEM5Q9Y2B1 443 aa15.9■□□□□ 0.14
CPSF2-203ENST00000554290 H7C1C5 153 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 SGCEO43556 437 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 GPR4P46093 362 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 LCN6P62502 163 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 PSG7Q13046 419 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 CDK5R2Q13319 367 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 TBPL2Q6SJ96 375 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 FAM216AQ8WUB2 273 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 COG8Q96MW5 612 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 ZNF570Q96NI8 536 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 SUCNR1Q9BXA5 334 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 UBAP1Q9NZ09 502 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 ADAM18Q9Y3Q7 739 aa15.89■□□□□ 0.13
CPSF2-203ENST00000554290 PRSS37A4D1T9 235 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 NDUFAB1O14561 156 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 CDC42EP2O14613 210 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 DOK2O60496 412 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 SERPINA1P01009 418 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 SCG5P05408 212 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 COX4I1P13073 169 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 TNFRSF1AP19438 455 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 CFPP27918 469 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 HTR5AP47898 357 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 SLC7A2P52569 658 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 LCN2P80188 198 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 ZNF771Q7L3S4 317 aaPredicted RBP15.88■□□□□ 0.13
CPSF2-203ENST00000554290 GCDHQ92947 438 aaPredicted RBP15.88■□□□□ 0.13
CPSF2-203ENST00000554290 HSH2DQ96JZ2 352 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 Q96M85 177 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 RBM4Q9BWF3 364 aaKnown RBP15.88■□□□□ 0.13
CPSF2-203ENST00000554290 C7orf69Q9H7B7 122 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 EFCAB1Q9HAE3 211 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 NMNAT1Q9HAN9 279 aaPredicted RBP15.88■□□□□ 0.13
CPSF2-203ENST00000554290 GMPR2Q9P2T1 348 aaKnown RBP15.88■□□□□ 0.13
CPSF2-203ENST00000554290 NPTNQ9Y639 398 aa15.88■□□□□ 0.13
CPSF2-203ENST00000554290 TEX13CA0A0J9YWL9 993 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 NME4O00746 187 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 CCDC22O60826 627 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 FOXH1O75593 365 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 PRSS23O95084 383 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 SBK2P0C263 348 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 LIMS1P48059 325 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 GSK3BP49841 420 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 GUCY1A3Q02108 690 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 AQP6Q13520 282 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 MESTQ5EB52 335 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 GPR139Q6DWJ6 353 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 BPIFB2Q8N4F0 458 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 FAM162AQ96A26 154 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 SAMD8Q96LT4 415 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 CCDC134Q9H6E4 229 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 PLEK2Q9NYT0 353 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 PURGQ9UJV8 347 aaKnown RBP15.87■□□□□ 0.13
CPSF2-203ENST00000554290 FAM32AQ9Y421 112 aaKnown RBP15.87■□□□□ 0.13
CPSF2-203ENST00000554290 ENPP4Q9Y6X5 453 aa15.87■□□□□ 0.13
CPSF2-203ENST00000554290 PPIAL4EA0A075B759 164 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 PPIAL4CA0A0B4J2A2 164 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 PPIAL4DF5H284 164 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 SURF4O15260 269 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 NDUFB2O95178 105 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 PPIAL4FP0DN26 164 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 ADRA2CP18825 462 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 KITLGP21583 273 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 FPR2P25090 351 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 SDHAP31040 664 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 VASH1Q7L8A9 365 aaPredicted RBP15.86■□□□□ 0.13
CPSF2-203ENST00000554290 FAM122BQ7Z309 247 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 KLHL36Q8N4N3 616 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 SPICQ8N5J4 248 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 OR2Z1Q8NG97 314 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 SLC7A13Q8TCU3 470 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 HAVCR1Q96D42 359 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 DCLRE1CQ96SD1 692 aaKnown RBP15.86■□□□□ 0.13
CPSF2-203ENST00000554290 RERGLQ9H628 205 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 TMEM106BQ9NUM4 274 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 RPS6KA6Q9UK32 745 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 STARD10Q9Y365 291 aa15.86■□□□□ 0.13
CPSF2-203ENST00000554290 A0A1W2PRQ8 180 aa15.85■□□□□ 0.13
CPSF2-203ENST00000554290 TMEM89A2RUT3 159 aa15.85■□□□□ 0.13
CPSF2-203ENST00000554290 SLC16A7O60669 478 aa15.85■□□□□ 0.13
CPSF2-203ENST00000554290 KHDRBS3O75525 346 aaKnown RBP15.85■□□□□ 0.13
CPSF2-203ENST00000554290 IGHV2-70P01814 119 aa15.85■□□□□ 0.13
CPSF2-203ENST00000554290 H1F0P07305 194 aaKnown RBP15.85■□□□□ 0.13
CPSF2-203ENST00000554290 CTLA4P16410 223 aa15.85■□□□□ 0.13
CPSF2-203ENST00000554290 ZNF26P17031 533 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms