RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZFP3Q96NJ6 502 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 KCTD14Q9BQ13 255 aaPredicted RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 TIMM29Q9BSF4 260 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CHCHD5Q9BSY4 110 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 DCUN1D5Q9BTE7 237 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 FAIM2Q9BWQ8 316 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 OCR1Q9BZK8 76 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SYT4Q9H2B2 425 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 NXF3Q9H4D5 531 aaKnown RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 TMEM38AQ9H6F2 299 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 JPT2Q9H910 190 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 GNB4Q9HAV0 340 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 NTN4Q9HB63 628 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SLC38A10Q9HBR0 1119 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 IFT46Q9NQC8 304 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SDHAF3Q9NRP4 125 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 NECAP2Q9NVZ3 263 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CLN6Q9NWW5 311 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 EMC3Q9P0I2 261 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 OR1A1Q9P1Q5 309 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SPRR3Q9UBC9 169 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 HMGXB4Q9UGU5 601 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 ADCY9O60503 1353 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 LRPPRCP42704 1394 aaKnown RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 MSH6P52701 1360 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ANKRD30BQ9BXX2 1392 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 IGLV4-3A0A075B6K6 122 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TRAV8-7A0A075B6U6 113 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 IGKV1D-8A0A087WSZ0 117 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TRAV9-2A0A087WT02 112 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 A0A0A6YYH2 397 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CIB4A0PJX0 185 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 FABP12A6NFH5 140 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 A6NJ64 397 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 F8VZ95 297 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 KRTAP4-16G5E9R7 235 aaPredicted RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 SMKR1H3BMG3 65 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 hCG_2039718K7EN88 272 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 GABRPO00591 440 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ITGB1BP1O14713 200 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 NUPL2O15504 423 aaKnown RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 SNAP91O60641 907 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 DPM1O60762 260 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ICOSLGO75144 302 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 RDH16O75452 317 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ADAP1O75689 374 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 EIF3GO75821 320 aaKnown RBP eCLIP1.74□□□□□ -2.13
SRP54-204ENST00000553923 MYO1DO94832 1006 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 RAB3DO95716 219 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 SEMA4FO95754 770 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 FADS2O95864 444 aaKnown RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 HCKP08631 526 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 STSP08842 583 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CCDC166P0CW27 439 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CT45A10P0DMU9 189 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 GGT1P19440 569 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TBPP20226 339 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 PSMB6P28072 239 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 NTSP30990 170 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 IL2RGP31785 369 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 UGT1A3P35503 534 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 MAGEA6P43360 314 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 VDAC2P45880 294 aaPredicted RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 HAAOP46952 286 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TFPI2P48307 235 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 KLK7P49862 253 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 XKP51811 444 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 NUTF2P61970 127 aaKnown RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 SLC25A11Q02978 314 aaKnown RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 TGFBR3Q03167 851 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 BCL2L1Q07817 233 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 FCHO2Q0JRZ9 810 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 C2orf80Q0P641 193 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 SLC39A6Q13433 755 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ZNF266Q14584 549 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 LTB4RQ15722 352 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TAL2Q16559 108 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ZSCAN26Q16670 478 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 EOGTQ5NDL2 527 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TPTE2P1Q5T6R2 138 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 OLFML2AQ68BL7 652 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CLEC6AQ6EIG7 209 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 THOC7Q6I9Y2 204 aaKnown RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 OR5M10Q6IEU7 315 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 UFSP1Q6NVU6 142 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 FAHD1Q6P587 224 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CD300LGQ6UXG3 332 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 FAM151BQ6UXP7 276 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TMIGD1Q6UXZ0 262 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 DNM1P46Q6ZS02 220 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 LINC00336Q6ZUF6 198 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TMEM179Q6ZVK1 233 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 AHSA2Q719I0 299 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ABHD13Q7L211 337 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 GDPD3Q7L5L3 318 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 PAGE2Q7Z2X7 111 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TMEM150AQ86TG1 271 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 HORMAD1Q86X24 394 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 RALGPS2Q86X27 583 aaPredicted RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 FUNDC1Q8IVP5 155 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms