RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 RAP2CQ9Y3L5 183 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 GMEB1Q9Y692 573 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 CSMD3Q7Z407 3707 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 NPIPB13A6NJU9 1138 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 ADARB2-AS1A8MUL3 147 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 NPIPB4C9JG80 1138 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 MLNRO43193 412 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 CHP2O43745 196 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 FMO6PO60774 539 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 SHOX2O60902 331 aaPredicted RBP7.47□□□□□ -1.21
PRKCH-208ENST00000553846 CH25HO95992 272 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 SERPINE1P05121 402 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 TUBG1P23258 451 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 SLC6A2P23975 617 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 GATA4P43694 442 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 ZNF84P51523 738 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 HOXA4Q00056 320 aaPredicted RBP7.47□□□□□ -1.21
PRKCH-208ENST00000553846 RPL18Q07020 188 aaKnown RBP7.47□□□□□ -1.21
PRKCH-208ENST00000553846 BST1Q10588 318 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 FADDQ13158 208 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 ZNF613Q6PF04 617 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 SLC25A47Q6Q0C1 308 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 UNQ6126/PRO20091Q6UXV3 157 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 DCDC5Q6ZRR9 648 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 MSANTD1Q6ZTZ1 278 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 NPEPL1Q8NDH3 523 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 OR10AD1Q8NGE0 317 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 OR8B3Q8NGG8 313 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 WIPF2Q8TF74 440 aaPredicted RBP7.47□□□□□ -1.21
PRKCH-208ENST00000553846 GTF2H4Q92759 462 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 HDAC2Q92769 488 aaKnown RBP7.47□□□□□ -1.21
PRKCH-208ENST00000553846 HAVCR1Q96D42 359 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 PKNOX2Q96KN3 472 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 OR8B2Q96RD0 313 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 KRTAP3-2Q9BYR7 98 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 TRIM15Q9C019 465 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 MEPEQ9NQ76 525 aaPredicted RBP7.47□□□□□ -1.21
PRKCH-208ENST00000553846 TUBG2Q9NRH3 451 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 CLN8Q9UBY8 286 aa7.47□□□□□ -1.21
PRKCH-208ENST00000553846 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.47□□□□□ -1.21
PRKCH-208ENST00000553846 SURF4O15260 269 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 RNF13O43567 381 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 TOX4O94842 621 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 IL6P05231 212 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 SCG5P05408 212 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 CST2P09228 141 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 ACADSP16219 412 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 GSTM3P21266 225 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 LAP3P28838 519 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 EPHA3P29320 983 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 RPL14P50914 215 aaKnown RBP7.46□□□□□ -1.22
PRKCH-208ENST00000553846 RAD23AP54725 363 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 PCBP3P57721 371 aaKnown RBP7.46□□□□□ -1.22
PRKCH-208ENST00000553846 RGS8P57771 180 aaPredicted RBP7.46□□□□□ -1.22
PRKCH-208ENST00000553846 CLRN1P58418 232 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 ABCE1P61221 599 aaKnown RBP7.46□□□□□ -1.22
PRKCH-208ENST00000553846 TAF11Q15544 211 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 CLEC12AQ5QGZ9 265 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 HHATQ5VTY9 493 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 FOXB2Q5VYV0 432 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 NXNQ6DKJ4 435 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 DHRS7BQ6IAN0 325 aaPredicted RBP7.46□□□□□ -1.22
PRKCH-208ENST00000553846 SLC35E4Q6ICL7 350 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 CRIP3Q6Q6R5 217 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 NLRC3Q7RTR2 1065 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 IFT20Q8IY31 132 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 GALNT4Q8N4A0 578 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 C10orf53Q8N6V4 93 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 ZNF454Q8N9F8 522 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 GPR32P1Q8NGA4 272 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 OR4D11Q8NGI4 311 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 NFKBIDQ8NI38 313 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 Q8TCH9 128 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 CMBLQ96DG6 245 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 WWC2-AS2Q96NR7 200 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 PRSS27Q9BQR3 290 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 SEMA6AQ9H2E6 1030 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 ELOVL3Q9HB03 270 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 TMEM27Q9HBJ8 222 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 CCNB1IP1Q9NPC3 277 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 NANSQ9NR45 359 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 SDR39U1Q9NRG7 319 aaPredicted RBP7.46□□□□□ -1.22
PRKCH-208ENST00000553846 FOXJ3Q9UPW0 622 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 SIGLEC9Q9Y336 463 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 STARD10Q9Y365 291 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 USH1CQ9Y6N9 552 aa7.46□□□□□ -1.22
PRKCH-208ENST00000553846 TRBV5-3A0A0A0MS03 114 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 RNASEK-C17orf49H0YIS7 233 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 M0R3H8 397 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 CLIC1O00299 241 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 ABHD16AO95870 558 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 F13BP05160 661 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 COX5BP10606 129 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 RAC2P15153 192 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 TGFBR2P37173 567 aa7.45□□□□□ -1.22
PRKCH-208ENST00000553846 ARHGDIAP52565 204 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms