RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 KLF3P57682 345 aaPredicted RBP12.19□□□□□ -0.46
PRKCH-207ENST00000553831 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
PRKCH-207ENST00000553831 AQP6Q13520 282 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 FLOT2Q14254 428 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 MEP1BQ16820 701 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 SPATA46Q5T0L3 261 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 SLC35F1Q5T1Q4 408 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 RPL13AP3Q6NVV1 102 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 RASSF6Q6ZTQ3 369 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 VASH1Q7L8A9 365 aaPredicted RBP12.19□□□□□ -0.46
PRKCH-207ENST00000553831 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.19□□□□□ -0.46
PRKCH-207ENST00000553831 SPATA24Q86W54 205 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 OR8D4Q8NGM9 314 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 PIMREGQ9BSJ6 248 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 CHID1Q9BWS9 393 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 RACGAP1Q9H0H5 632 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 FN3KQ9H479 309 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 RPRD1BQ9NQG5 326 aaKnown RBP12.19□□□□□ -0.46
PRKCH-207ENST00000553831 TAAR3PQ9P1P4 343 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 ASH2LQ9UBL3 628 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 EIF3KQ9UBQ5 218 aaKnown RBP12.19□□□□□ -0.46
PRKCH-207ENST00000553831 B9D1Q9UPM9 204 aa12.19□□□□□ -0.46
PRKCH-207ENST00000553831 LOC390937A0A1W2PQ73 354 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 OR6C68A6NDL8 312 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 VWC2LB2RUY7 222 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 NDUFS8O00217 210 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 BHLHE40O14503 412 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 SOX14O95416 240 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 CST1P01037 141 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 NAT2P11245 290 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 CENPAP49450 140 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 SELENOVP59797 346 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 GLO1Q04760 184 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.18□□□□□ -0.46
PRKCH-207ENST00000553831 LOXL1Q08397 574 aaPredicted RBP12.18□□□□□ -0.46
PRKCH-207ENST00000553831 BNIP1Q12981 228 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 NKPD1Q17RQ9 610 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 TMEM249Q2WGJ8 235 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 OR6V1Q8N148 313 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 NPEPL1Q8NDH3 523 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 OR10G2Q8NGC3 310 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 OR52E2Q8NGJ4 325 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 ABHD4Q8TB40 342 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 POM121Q96HA1 1249 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 DGCR6LQ9BY27 220 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 CADM1Q9BY67 442 aaKnown RBP12.18□□□□□ -0.46
PRKCH-207ENST00000553831 MS4A5Q9H3V2 200 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 SRA1Q9HD15 236 aaKnown RBP12.18□□□□□ -0.46
PRKCH-207ENST00000553831 TBC1D23Q9NUY8 699 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 PLEK2Q9NYT0 353 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 IL20Q9NYY1 176 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 NDRG4Q9ULP0 352 aaKnown RBP12.18□□□□□ -0.46
PRKCH-207ENST00000553831 POMPQ9Y244 141 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 POLR1DQ9Y2S0 133 aa12.18□□□□□ -0.46
PRKCH-207ENST00000553831 CHD3Q12873 2000 aaKnown RBP12.17□□□□□ -0.46
PRKCH-207ENST00000553831 INAFM1C9JVW0 142 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 HAX1O00165 279 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 ICMTO60725 284 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 NGFP01138 241 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 COX5BP10606 129 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 MPV17P39210 176 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 NR4A2P43354 598 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 ERFP50548 548 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 PPP1CBP62140 327 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 GGTLC2Q14390 218 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 GK3PQ14409 553 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 KCNMB1Q16558 191 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 CCDC92Q53HC0 331 aaPredicted RBP12.17□□□□□ -0.46
PRKCH-207ENST00000553831 TMEM255AQ5JRV8 349 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 ZBTB46Q86UZ6 589 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 CYB561A3Q8NBI2 242 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 SLC26A10Q8NG04 563 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 SLC25A40Q8TBP6 338 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 UBASH3BQ8TF42 649 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 SNX33Q8WV41 574 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 IPCEF1Q8WWN9 437 aaPredicted RBP12.17□□□□□ -0.46
PRKCH-207ENST00000553831 GTF3AQ92664 365 aaKnown RBP12.17□□□□□ -0.46
PRKCH-207ENST00000553831 MARS2Q96GW9 593 aaKnown RBP12.17□□□□□ -0.46
PRKCH-207ENST00000553831 C4orf45Q96LM5 186 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 NIPSNAP1Q9BPW8 284 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 TSSK6Q9BXA6 273 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 OR2J1Q9GZK6 312 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 ARMC1Q9NVT9 282 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 SLCO1C1Q9NYB5 712 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 LHFPL6Q9Y693 200 aa12.17□□□□□ -0.46
PRKCH-207ENST00000553831 IGHV4-61A0A0C4DH41 118 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 TCRBV3S1A0A5B6 114 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 OR6C6A6NF89 314 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 LYNX1G3V0Z9 82 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 RER1O15258 196 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 GSC2O15499 205 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 CD5LO43866 347 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 NCR1O76036 304 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 ABHD16AO95870 558 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 IGHV3-13P01766 116 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 HPXP02790 462 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 TP53P04637 393 aaPredicted RBP12.16□□□□□ -0.46
PRKCH-207ENST00000553831 LYNX1P0DP58 116 aa12.16□□□□□ -0.46
PRKCH-207ENST00000553831 GSTM3P21266 225 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms