RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CR1P17927 2039 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 IGLV3-9A0A075B6K5 115 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 M0R233 179 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 SYNGR3O43761 229 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 DOK2O60496 412 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 SOX14O95416 240 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 LCKP06239 509 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 HEXAP06865 529 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 ADRA2AP08913 450 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 CSF3P09919 207 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 ZNF250P15622 560 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 CBX1P83916 185 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 CD300LDQ6UXZ3 194 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 VASH1Q7L8A9 365 aaPredicted RBP17.48■□□□□ 0.39
FOXA1-203ENST00000553751 NPEPL1Q8NDH3 523 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 C10orf105Q8TEF2 133 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 GIPC3Q8TF64 312 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 FAM168AQ92567 244 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 DDOQ99489 341 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 FEVQ99581 238 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 SRA1Q9HD15 236 aaKnown RBP17.48■□□□□ 0.39
FOXA1-203ENST00000553751 ARMC1Q9NVT9 282 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 DUSP13Q9UII6 198 aa17.48■□□□□ 0.39
FOXA1-203ENST00000553751 NDRG4Q9ULP0 352 aaKnown RBP17.48■□□□□ 0.39
FOXA1-203ENST00000553751 GNGT2O14610 69 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 SGCEO43556 437 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 CLPTM1O96005 669 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 COX5BP10606 129 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 ALDH3B1P43353 468 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 MAD2L1BPQ15013 274 aaPredicted RBP17.47■□□□□ 0.39
FOXA1-203ENST00000553751 MEP1BQ16820 701 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 ZNF362Q5T0B9 420 aaPredicted RBP17.47■□□□□ 0.39
FOXA1-203ENST00000553751 RFPL4BQ6ZWI9 263 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 Q71RC1 249 aaPredicted RBP17.47■□□□□ 0.39
FOXA1-203ENST00000553751 LNX2Q8N448 690 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 ICA1LQ8NDH6 482 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 SLC26A10Q8NG04 563 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 OR1J1Q8NGS3 322 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 OR4Q3Q8NH05 313 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 TSSK6Q9BXA6 273 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 TPK1Q9H3S4 243 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 YY1AP1Q9H869 796 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 REV1Q9UBZ9 1251 aa17.47■□□□□ 0.39
FOXA1-203ENST00000553751 A0A1W2PPW3 197 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 TFP02787 698 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 SLC25A16P16260 332 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 HTR5AP47898 357 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 CENPAP49450 140 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 KLF3P57682 345 aaPredicted RBP17.46■□□□□ 0.39
FOXA1-203ENST00000553751 GLO1Q04760 184 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 KRTAP1-1Q07627 177 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 CYB561A3Q8NBI2 242 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 SYNPRQ8TBG9 265 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 NEU4Q8WWR8 484 aaPredicted RBP17.46■□□□□ 0.39
FOXA1-203ENST00000553751 MMADHCQ9H3L0 296 aaPredicted RBP17.46■□□□□ 0.39
FOXA1-203ENST00000553751 MYOZ1Q9NP98 299 aaPredicted RBP17.46■□□□□ 0.39
FOXA1-203ENST00000553751 PDP1Q9P0J1 537 aaPredicted RBP17.46■□□□□ 0.39
FOXA1-203ENST00000553751 EIF3KQ9UBQ5 218 aaKnown RBP17.46■□□□□ 0.39
FOXA1-203ENST00000553751 DNAJB9Q9UBS3 223 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 POLR1DQ9Y2S0 133 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 LHFPL6Q9Y693 200 aa17.46■□□□□ 0.39
FOXA1-203ENST00000553751 NIPBLQ6KC79 2804 aaeCLIP17.46■□□□□ 0.39
FOXA1-203ENST00000553751 OR6C6A6NF89 314 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 RER1O15258 196 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 ERCC1P07992 297 aaPredicted RBP17.45■□□□□ 0.38
FOXA1-203ENST00000553751 PDLIM4P50479 330 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 RIPPLY3P57055 190 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 HIST1H3AP68431 136 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 COX10Q12887 443 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 SLC36A3Q495N2 470 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 CCDC92Q53HC0 331 aaPredicted RBP17.45■□□□□ 0.38
FOXA1-203ENST00000553751 SPATA46Q5T0L3 261 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 HIST2H3PS2Q5TEC6 136 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 HIST2H3AQ71DI3 136 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.45■□□□□ 0.38
FOXA1-203ENST00000553751 HS3ST5Q8IZT8 346 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 SLC37A3Q8NCC5 494 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 OR2T33Q8NG76 320 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 ABHD4Q8TB40 342 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 C4orf45Q96LM5 186 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 MS4A5Q9H3V2 200 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 PLEK2Q9NYT0 353 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 BAIAP2Q9UQB8 552 aa17.45■□□□□ 0.38
FOXA1-203ENST00000553751 FN1P02751 2386 aaKnown RBP17.45■□□□□ 0.38
FOXA1-203ENST00000553751 NAV3Q8IVL0 2385 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 VWC2LB2RUY7 222 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 NDUFS8O00217 210 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 E2F6O75461 281 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 NGFP01138 241 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 TEKQ02763 1124 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 TMEM255AQ5JRV8 349 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 UNQ6126/PRO20091Q6UXV3 157 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 MARS2Q96GW9 593 aaKnown RBP17.44■□□□□ 0.38
FOXA1-203ENST00000553751 RBM4Q9BWF3 364 aaKnown RBP17.44■□□□□ 0.38
FOXA1-203ENST00000553751 TAAR3PQ9P1P4 343 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 ATPIF1Q9UII2 106 aa17.44■□□□□ 0.38
FOXA1-203ENST00000553751 HIVEP2P31629 2446 aa17.43■□□□□ 0.38
FOXA1-203ENST00000553751 CHD3Q12873 2000 aaKnown RBP17.43■□□□□ 0.38
FOXA1-203ENST00000553751 NAT2P11245 290 aa17.43■□□□□ 0.38
FOXA1-203ENST00000553751 DAOP14920 347 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms