RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CORO6Q6QEF8 472 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 VHLLQ6RSH7 139 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 UNQ6126/PRO20091Q6UXV3 157 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 ERI1Q8IV48 349 aaKnown RBP12□□□□□ -0.49
TUBB3-202ENST00000553656 LINC00346Q8IVM7 164 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 GID4Q8IVV7 300 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF611Q8N823 705 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF511Q8NB15 262 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 CPEB3Q8NE35 698 aaKnown RBP12□□□□□ -0.49
TUBB3-202ENST00000553656 OR8J1Q8NGP2 316 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 ZNRF4Q8WWF5 429 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 HRASLS5Q96KN8 279 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 IL4I1Q96RQ9 567 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 INTS14Q96SY0 518 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 MBOAT4Q96T53 435 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 PITX2Q99697 317 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 HDHD2Q9H0R4 259 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 WNT5BQ9H1J7 359 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 MRPL22Q9NWU5 206 aaKnown RBP12□□□□□ -0.49
TUBB3-202ENST00000553656 EIF3KQ9UBQ5 218 aaKnown RBP12□□□□□ -0.49
TUBB3-202ENST00000553656 GDF2Q9UK05 429 aaPredicted RBP12□□□□□ -0.49
TUBB3-202ENST00000553656 GMPPBQ9Y5P6 360 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 LHFPL6Q9Y693 200 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
TUBB3-202ENST00000553656 C5orf49A4QMS7 147 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF593O00488 134 aaPredicted RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 CASQ2O14958 399 aaPredicted RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 RER1O15258 196 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 RAF1P04049 648 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 COX5BP10606 129 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 CCL2P13500 99 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 GGT2P36268 569 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 FABP6P51161 128 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 RPS23P62266 143 aaKnown RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 SNTB2Q13425 540 aaKnown RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 ELFN2Q5R3F8 820 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 OGFRL1Q5TC84 451 aaPredicted RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 LINC01590Q5TEZ4 76 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 NXNL2Q5VZ03 156 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 SLC18B1Q6NT16 456 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 ARL9Q6T311 187 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 LYPD4Q6UWN0 246 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 PAMR1Q6UXH9 720 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 VASH1Q7L8A9 365 aaPredicted RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 CDH24Q86UP0 819 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 FBXL14Q8N1E6 418 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 NUP37Q8NFH4 326 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 BBS1Q8NFJ9 593 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 OR6N2Q8NGY6 317 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 OR1F12Q8NHA8 337 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 SMAP2Q8WU79 429 aaPredicted RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 TRUB1Q8WWH5 349 aaKnown RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 NRGNQ92686 78 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 NEUROG1Q92886 237 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 ZMYND19Q96E35 227 aaPredicted RBP11.99□□□□□ -0.49
TUBB3-202ENST00000553656 CCL19Q99731 98 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 DHRS9Q9BPW9 319 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 WDR76Q9H967 626 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 CA10Q9NS85 328 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 CYB5R1Q9UHQ9 305 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 ABCA4P78363 2273 aa11.99□□□□□ -0.49
TUBB3-202ENST00000553656 OR6C6A6NF89 314 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 SLC22A31A6NKX4 558 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 E7EQL1 145 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF35P13682 527 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 NR4A1P22736 598 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 DNASE1P24855 282 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 RAD52P43351 418 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 ECH1Q13011 328 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 TEX30Q5JUR7 227 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF544Q6NX49 715 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 B3GLCTQ6Y288 498 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 CFAP77Q6ZQR2 320 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 SHFQ7M4L6 423 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 LILRB1Q8NHL6 650 aaPredicted RBP11.98□□□□□ -0.49
TUBB3-202ENST00000553656 RFKQ969G6 155 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 COQ7Q99807 217 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 APOL4Q9BPW4 351 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 VCX3BQ9H321 246 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 NKX1-2Q9UD57 310 aaPredicted RBP11.98□□□□□ -0.49
TUBB3-202ENST00000553656 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 ST6GALNAC2Q9UJ37 374 aa11.98□□□□□ -0.49
TUBB3-202ENST00000553656 LOC100130705A0A1B0GUX0 176 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 SNTNA6NMZ2 147 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 SYNGR3O43761 229 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 MPZL2O60487 215 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 ABHD16AO95870 558 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 FAM157BP0CG42 384 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 SLC2A5P22732 501 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 PCSK6P29122 969 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 APOBEC3AP31941 199 aaPredicted RBP11.97□□□□□ -0.49
TUBB3-202ENST00000553656 NAA10P41227 235 aaPredicted RBP11.97□□□□□ -0.49
TUBB3-202ENST00000553656 RPS27P42677 84 aaKnown RBP11.97□□□□□ -0.49
TUBB3-202ENST00000553656 HGFACQ04756 655 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 EIF2B1Q14232 305 aaKnown RBP11.97□□□□□ -0.49
TUBB3-202ENST00000553656 TAF13Q15543 124 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 CCDC92Q53HC0 331 aaPredicted RBP11.97□□□□□ -0.49
TUBB3-202ENST00000553656 AADACL4Q5VUY2 407 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms