RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 H3BNX3 289 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 SGCEO43556 437 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 MITFO75030 526 aaPredicted RBP19.67■□□□□ 0.74
TDP1-206ENST00000553569 TFP02787 698 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 CLUP10909 449 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 HTR5AP47898 357 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 RPS23P62266 143 aaKnown RBP19.67■□□□□ 0.74
TDP1-206ENST00000553569 SNRPD2P62316 118 aaKnown RBP19.67■□□□□ 0.74
TDP1-206ENST00000553569 ADAM8P78325 824 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 MSMPQ1L6U9 139 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 MST1LQ2TV78 715 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 TMEM236Q5W0B7 351 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 CORO6Q6QEF8 472 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 WFDC11Q8NEX6 87 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 ZNRF4Q8WWF5 429 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 GABARAPL1Q9H0R8 117 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 MED20Q9H944 212 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 PLEK2Q9NYT0 353 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 GDF2Q9UK05 429 aaPredicted RBP19.67■□□□□ 0.74
TDP1-206ENST00000553569 FZR1Q9UM11 496 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 OAZ3Q9UMX2 235 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 LHFPL6Q9Y693 200 aa19.67■□□□□ 0.74
TDP1-206ENST00000553569 RTTNQ86VV8 2226 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 TVP23AA6NH52 213 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 FAM183AA6NL82 134 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 B9A039 149 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 RER1O15258 196 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 NDUFS7O75251 213 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 SPI1P17947 270 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 GLRXP35754 106 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 SLC25A1P53007 311 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 EFNB3Q15768 340 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 SWI5Q1ZZU3 235 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 SHEQ5VZ18 495 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 LYPD4Q6UWN0 246 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 VASH1Q7L8A9 365 aaPredicted RBP19.66■□□□□ 0.74
TDP1-206ENST00000553569 LINC00346Q8IVM7 164 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 NMNAT2Q9BZQ4 307 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 PLK3Q9H4B4 646 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 MRPL22Q9NWU5 206 aaKnown RBP19.66■□□□□ 0.74
TDP1-206ENST00000553569 NDRG4Q9ULP0 352 aaKnown RBP19.66■□□□□ 0.74
TDP1-206ENST00000553569 ARFGEF3Q5TH69 2177 aa19.66■□□□□ 0.74
TDP1-206ENST00000553569 IGHV4-39P01824 125 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 LCKP06239 509 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 BMP4P12644 408 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 WNT5AP41221 380 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 CRISP1P54107 249 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 ERVS71-1P61550 626 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 CDK5Q00535 292 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 CCDC92Q53HC0 331 aaPredicted RBP19.65■□□□□ 0.74
TDP1-206ENST00000553569 RGS7BPQ6MZT1 257 aaPredicted RBP19.65■□□□□ 0.74
TDP1-206ENST00000553569 PARP8Q8N3A8 854 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 OR6K6Q8NGW6 343 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 MRPL24Q96A35 216 aaKnown RBP19.65■□□□□ 0.74
TDP1-206ENST00000553569 SYT3Q9BQG1 590 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 CDADC1Q9BWV3 514 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 HCAR1Q9BXC0 346 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 MRPL37Q9BZE1 423 aaKnown RBP19.65■□□□□ 0.74
TDP1-206ENST00000553569 SLC25A19Q9HC21 320 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 PMF1-BGLAPU3KQ54 211 aa19.65■□□□□ 0.74
TDP1-206ENST00000553569 SURF4O15260 269 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 HMGN1P05114 100 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 ZNF823P16415 610 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 PAICSP22234 425 aaKnown RBP19.64■□□□□ 0.73
TDP1-206ENST00000553569 IGFBP5P24593 272 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 UCP2P55851 309 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 RAB35Q15286 201 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 KDM4DQ6B0I6 523 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 C10orf67Q8IYJ2 551 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 PLEKHA8Q96JA3 519 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 TEX12Q9BXU0 123 aa19.64■□□□□ 0.73
TDP1-206ENST00000553569 EIF3KQ9UBQ5 218 aaKnown RBP19.64■□□□□ 0.73
TDP1-206ENST00000553569 H7C417 338 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 SYNGR3O43761 229 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 COX5BP10606 129 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 PCSK6P29122 969 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 RPS27P42677 84 aaKnown RBP19.63■□□□□ 0.73
TDP1-206ENST00000553569 RAD52P43351 418 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 SLC18B1Q6NT16 456 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 TMEM154Q6P9G4 183 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 RFPL4BQ6ZWI9 263 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 LRP11Q86VZ4 500 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 TGIF2LYQ8IUE0 185 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 ZNF101Q8IZC7 436 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 GJC3Q8NFK1 279 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 OR1J1Q8NGS3 322 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 OR2AJ1Q8NGZ0 328 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 OR1F12Q8NHA8 337 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 ABHD4Q8TB40 342 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 SLC7A6Q92536 515 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 Q96MF0 132 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 BCL2L14Q9BZR8 327 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 DYNLRB1Q9NP97 96 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 COMMD3-BMI1R4GMX3 469 aa19.63■□□□□ 0.73
TDP1-206ENST00000553569 TMEM129A0AVI4 362 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 OR6C6A6NF89 314 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 PRR23D1E9PI22 279 aaPredicted RBP19.62■□□□□ 0.73
TDP1-206ENST00000553569 PRR23D2P0DMB1 279 aaPredicted RBP19.62■□□□□ 0.73
TDP1-206ENST00000553569 FMO3P31513 532 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 GGT2P36268 569 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms