RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 MTNR1AP48039 350 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF133P52736 654 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-219ENST00000553488 BTG1P62324 171 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 PLP2Q04941 152 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 RGNQ15493 299 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 DEFB112Q30KQ8 113 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 PABPC1L2AQ5JQF8 200 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF362Q5T0B9 420 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-219ENST00000553488 THEM4Q5T1C6 240 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 C17orf107Q6ZR85 190 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 MSANTD1Q6ZTZ1 278 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 LRRC28Q86X40 367 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-219ENST00000553488 NUDCD3Q8IVD9 361 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 C10orf111Q8N326 155 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 KLHL36Q8N4N3 616 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 NOXO1Q8NFA2 376 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 OR52E2Q8NGJ4 325 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 OR1J2Q8NGS2 313 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 OR4F5Q8NH21 305 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 SLC25A40Q8TBP6 338 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 KLF14Q8TD94 323 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF566Q969W8 418 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 NABP1Q96AH0 204 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 SLC47A1Q96FL8 570 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 SLC25A44Q96H78 314 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-219ENST00000553488 CCT8L2Q96SF2 557 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 ARHGDIGQ99819 225 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 OR2J1Q9GZK6 312 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 EGLN1Q9GZT9 426 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 CACYBPQ9HB71 228 aaKnown RBP6.08□□□□□ -1.44
ATXN3-219ENST00000553488 BEX1Q9HBH7 125 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 MSL2Q9HCI7 577 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 TAS2R5Q9NYW4 299 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 OR5V1Q9UGF6 321 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 ZDHHC8Q9ULC8 765 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 LRCH1Q9Y2L9 728 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 SACSQ9NZJ4 4579 aa6.08□□□□□ -1.44
ATXN3-219ENST00000553488 BIRC6Q9NR09 4857 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 IGHV2-70DA0A0C4DH43 119 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 IQCMA0A1B0GVH7 501 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 PLSCR5A0PG75 271 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 CLPSL1A2RUU4 121 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 WDR91A4D1P6 747 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 CEACAM18A8MTB9 384 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 CLPXO76031 633 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 LYPD3O95274 346 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 PTHP01270 115 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 IL6P05231 212 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 QDPRP09417 244 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 SBK2P0C263 348 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 SELEP16581 610 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF32P17041 273 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 STOMP27105 288 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 APLNRP35414 380 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 SLC1A6P48664 564 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 CDH12P55289 794 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 RGS8P57771 180 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-219ENST00000553488 FADDQ13158 208 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 OR1Q1Q15612 314 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF74Q16587 644 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF718Q3SXZ3 478 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 SPATS1Q496A3 300 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 ESCO2Q56NI9 601 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 C10orf128Q5T292 105 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 FIP1L1Q6UN15 594 aaKnown RBP6.07□□□□□ -1.44
ATXN3-219ENST00000553488 Q6ZR03 302 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 MSRB3Q8IXL7 192 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 NUDT10Q8NFP7 164 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 OR9I1Q8NGQ6 314 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 GTF2H4Q92759 462 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 MCHR2Q969V1 340 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 NMD3Q96D46 503 aaKnown RBP6.07□□□□□ -1.44
ATXN3-219ENST00000553488 NUDT11Q96G61 164 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 AJUBAQ96IF1 538 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 DCLRE1CQ96SD1 692 aaKnown RBP6.07□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF347Q96SE7 839 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 ZBTB18Q99592 522 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 MRPL13Q9BYD1 178 aaKnown RBP6.07□□□□□ -1.44
ATXN3-219ENST00000553488 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 CHIAQ9BZP6 476 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 PAIP1Q9H074 479 aaKnown RBP6.07□□□□□ -1.44
ATXN3-219ENST00000553488 LRMDAQ9H2I8 198 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 RNF121Q9H920 327 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 MARCH7Q9H992 704 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 SLCO1B3Q9NPD5 702 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 CYSLTR2Q9NS75 346 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 PNPOQ9NVS9 261 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 IL20RAQ9UHF4 553 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 UGT2A1Q9Y4X1 527 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
ATXN3-219ENST00000553488 EPPK1P58107 5090 aaKnown RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 IGKV1D-43A0A0B4J1Z2 117 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 C5orf49A4QMS7 147 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 TMEM247A6NEH6 219 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 GSTA4O15217 222 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 BIRC5O15392 142 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 CHP2O43745 196 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 TGDSO95455 350 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 ANP32DO95626 131 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 IGHG1P01857 330 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms