RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PABPC1L2AQ5JQF8 200 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 TTC23Q5W5X9 447 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 CFAP77Q6ZQR2 320 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 VASH1Q7L8A9 365 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 OR6K6Q8NGW6 343 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 LILRB1Q8NHL6 650 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 ST7LQ8TDW4 575 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 C14orf79Q96F83 325 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 PLPPR2Q96GM1 343 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 ADGRL4Q9HBW9 690 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 MOV10Q9HCE1 1003 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 TIMM10BQ9Y5J6 103 aa12.88□□□□□ -0.35
MTHFD1-204ENST00000553405 SHISA9B4DS77 424 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 RER1O15258 196 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 SYNGR3O43761 229 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 SELENOFO60613 162 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 GOSR1O95249 250 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 PLAUP00749 431 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 ZNF35P13682 527 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 PTAFRP25105 342 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 HTR1FP30939 366 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 CALCRP30988 508 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 CAPZA2P47755 286 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 ENTPD1P49961 510 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 NAAAQ02083 359 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 IL18R1Q13478 541 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 ALKBH2Q6NS38 261 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 ZNF774Q6NX45 483 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 CORO6Q6QEF8 472 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 IZUMO2Q6UXV1 221 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 LINC00346Q8IVM7 164 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 GID4Q8IVV7 300 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 DEPDC4Q8N2C3 294 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 PAQR4Q8N4S7 273 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 ZNF555Q8NEP9 628 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 AKR7LQ8NHP1 331 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 CYGBQ8WWM9 190 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 OTULINQ96BN8 352 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 AMELYQ99218 206 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 VCXQ9H320 206 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 RASSF1Q9NS23 344 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 GDF2Q9UK05 429 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 KLHDC2Q9Y2U9 406 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
MTHFD1-204ENST00000553405 AKAP9Q99996 3911 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 IGHV2OR16-5A0A0B4J2B6 119 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 PRR32B1ATL7 298 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 J3QRE1 110 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 M0R1B8 84 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 ZNF593O00488 134 aaPredicted RBP12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 ICMTO60725 284 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 VHLP40337 213 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 GUCA1AP43080 201 aaPredicted RBP12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 PCBD1P61457 104 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 ADAM8P78325 824 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 HGFACQ04756 655 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 C6orf52Q5T4I8 152 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 SMAP2Q8WU79 429 aaPredicted RBP12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 MARVELD3Q96A59 401 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 POM121L2Q96KW2 1035 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 INTS14Q96SY0 518 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 NGBQ9NPG2 151 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
MTHFD1-204ENST00000553405 PDZD2O15018 2839 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 HEATR1Q9H583 2144 aaKnown RBP12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 CASKO14936 926 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 SGCEO43556 437 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 MPZL2O60487 215 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 RAB36O95755 333 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 HLA-DQA2P01906 255 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 COX5BP10606 129 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 APEX1P27695 318 aaKnown RBP12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 NAA10P41227 235 aaPredicted RBP12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 NR1H2P55055 460 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 CDH11P55287 796 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 TMED1Q13445 227 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 RAB35Q15286 201 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 SMN1Q16637 294 aaKnown RBP12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 TMEM108Q6UXF1 575 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 DPY19L4Q7Z388 723 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 CDC20BQ86Y33 519 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 ERI1Q8IV48 349 aaKnown RBP12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 GJC3Q8NFK1 279 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 OTOSQ8NHW6 89 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 PIK3IP1Q96FE7 263 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 APOL4Q9BPW4 351 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 VCX3BQ9H321 246 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 ESRP2Q9H6T0 727 aaKnown RBP12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 CCNB1IP1Q9NPC3 277 aa12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 DDX28Q9NUL7 540 aaKnown RBP12.85□□□□□ -0.35
MTHFD1-204ENST00000553405 WARS2Q9UGM6 360 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms