RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MT-ND1P03886 318 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 CRYBA1P05813 215 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 CST2P09228 141 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 FUT1P19526 365 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 GSTM3P21266 225 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 KITLGP21583 273 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 GNB2P62879 340 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 SELPLGQ14242 412 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 ENDOGQ14249 297 aaKnown RBP7.59□□□□□ -1.19
SYNE2-209ENST00000553308 CYP51A1Q16850 503 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 RUSC1-AS1Q66K80 236 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 ASPHD2Q6ICH7 369 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 EPGNQ6UW88 154 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 KLBQ86Z14 1044 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 NKAIN4Q8IVV8 208 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 ALDH16A1Q8IZ83 802 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 C11orf65Q8NCR3 313 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF420Q8TAQ5 688 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-209ENST00000553308 TMEM255BQ8WV15 326 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 RAB40AQ8WXH6 277 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 UBE2FQ969M7 185 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 TAMM41Q96BW9 452 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 SGTBQ96EQ0 304 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 THOC1Q96FV9 657 aaKnown RBP7.59□□□□□ -1.19
SYNE2-209ENST00000553308 RBM4BQ9BQ04 359 aaKnown RBP7.59□□□□□ -1.19
SYNE2-209ENST00000553308 PCDHAC1Q9H158 963 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 PRDM13Q9H4Q3 707 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 GCM1Q9NP62 436 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 MAN2C1Q9NTJ4 1040 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 STX18Q9P2W9 335 aaKnown RBP7.59□□□□□ -1.19
SYNE2-209ENST00000553308 IL19Q9UHD0 177 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 TIMM10BQ9Y5J6 103 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 USH1CQ9Y6N9 552 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 WNK1Q9H4A3 2382 aa7.59□□□□□ -1.2
SYNE2-209ENST00000553308 PRKDCP78527 4128 aaKnown RBP7.59□□□□□ -1.2
SYNE2-209ENST00000553308 IGHV3-64DA0A0J9YX35 117 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 A0A1W2PPL8 197 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 CYB5R3P00387 301 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-209ENST00000553308 SCG5P05408 212 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 TSPAN19P0C672 248 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 MTPNP58546 118 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 FGF12P61328 243 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 LAPTM4AQ15012 233 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 RUNDC3AQ59EK9 446 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 WDR93Q6P2C0 686 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 DLEU7Q6UYE1 221 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 Q6YL49 198 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 FOXL2NBQ6ZUU3 175 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 OR5AS1Q8N127 324 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 NPEPL1Q8NDH3 523 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 OR10AD1Q8NGE0 317 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 CMBLQ96DG6 245 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 EBF4Q9BQW3 602 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 NUDT16L1Q9BRJ7 211 aaKnown RBP7.58□□□□□ -1.2
SYNE2-209ENST00000553308 TMEM246Q9BRR3 403 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 TXNIPQ9H3M7 391 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 TMEM165Q9HC07 324 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.58□□□□□ -1.2
SYNE2-209ENST00000553308 NDRG4Q9ULP0 352 aaKnown RBP7.58□□□□□ -1.2
SYNE2-209ENST00000553308 ZNF281Q9Y2X9 895 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 V9GYY5 206 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-209ENST00000553308 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
SYNE2-209ENST00000553308 KIR2DS1A0A191URI9 304 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 GMNCA6NCL1 334 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 NPIPB13A6NJU9 1138 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 NPIPB4C9JG80 1138 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 SURF4O15260 269 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 POLR3GO15318 223 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-209ENST00000553308 PIP5K1CO60331 668 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 DOK2O60496 412 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 SHOX2O60902 331 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-209ENST00000553308 ERLIN1O75477 346 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 MELTFP08582 738 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 NR2C1P13056 603 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 SELEP16581 610 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 TNFRSF1BP20333 461 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 MSR1P21757 451 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 HTR5AP47898 357 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 PITPNBP48739 271 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 CRYBA2P53672 197 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 PCBD1P61457 104 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 AGKQ53H12 422 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 ALG10Q5BKT4 473 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 FAM201AQ5SY85 155 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 GPR157Q5UAW9 335 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 SLC27A4Q6P1M0 643 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 ARL9Q6T311 187 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 IGFN1Q86VF2 1251 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 FITM2Q8N6M3 262 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 ATG16L2Q8NAA4 619 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 OR8B3Q8NGG8 313 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 SLC26A7Q8TE54 656 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 LIPHQ8WWY8 451 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 SLC7A6Q92536 515 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 HAVCR1Q96D42 359 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 NEIL1Q96FI4 390 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-209ENST00000553308 PLEKHA8Q96JA3 519 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 MEGF10Q96KG7 1140 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 OR8B2Q96RD0 313 aa7.57□□□□□ -1.2
SYNE2-209ENST00000553308 ALG12Q9BV10 488 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms