RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NDUFAF6Q330K2 333 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 KRT71Q3SY84 523 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 DCST2Q5T1A1 773 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 METTL11BQ5VVY1 283 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 FAM90A2PQ658T7 463 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 SFRP4Q6FHJ7 346 aaPredicted RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 FAM71E1Q6IPT2 247 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF813Q6ZN06 617 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CYS1Q717R9 158 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 EPHX4Q8IUS5 362 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 LYG1Q8N1E2 194 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF283Q8N7M2 679 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 SLC30A7Q8NEW0 376 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 OR8B3Q8NGG8 313 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CDC26Q8NHZ8 85 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 VANGL1Q8TAA9 524 aaPredicted RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 C8orf46Q8TAG6 207 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 FAM76AQ8TAV0 307 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 PYROXD1Q8WU10 500 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 TFAP2CQ92754 450 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CDS1Q92903 461 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 PHF21BQ96EK2 531 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 GIMAP5Q96F15 307 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ATP6V1G3Q96LB4 118 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 OR8B2Q96RD0 313 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF382Q96SR6 550 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 TMEM109Q9BVC6 243 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ROPN1BQ9BZX4 212 aaPredicted RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 RABEP2Q9H5N1 569 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ROPN1Q9HAT0 212 aaPredicted RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 TRIM36Q9NQ86 728 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 ADPRHL2Q9NX46 363 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 NINJ2Q9NZG7 142 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CPSF2Q9P2I0 782 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CLN8Q9UBY8 286 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 CHMP2BQ9UQN3 213 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 RCE1Q9Y256 329 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 UBE2J1Q9Y385 318 aaPredicted RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 TEX264Q9Y6I9 313 aa4.26□□□□□ -1.73
CKAP4-203ENST00000553039 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
CKAP4-203ENST00000553039 A0A0U1RQK1 487 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 IQCMA0A1B0GVH7 501 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 EXOC1LA0A1B0GW35 172 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SMIM23A6NLE4 172 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 CEACAM18A8MTB9 384 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 POLR3GO15318 223 aaPredicted RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 RGS16O15492 202 aaPredicted RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SLC25A17O43808 307 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SMIM24O75264 130 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 BANF1O75531 89 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 STX11O75558 287 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SLC22A3O75751 556 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 FSTL3O95633 263 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 PAHP00439 452 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 AK1P00568 194 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SHBGP04278 402 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 HMGN2P05204 90 aaKnown RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 GSTA2P09210 222 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ATP6V1B1P15313 513 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 HMOX2P30519 316 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 CFHR2P36980 270 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 PITPNBP48739 271 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 NPY4RP50391 375 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 CDH13P55290 713 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 CLDN17P56750 224 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 CBX1P83916 185 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SRSF3P84103 164 aaKnown RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 DGCR2P98153 550 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 DLG1Q12959 904 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 TRAF3Q13114 568 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 PMS2P3Q13401 168 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 FASTKD3Q14CZ7 662 aaKnown RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ZMYND11Q15326 602 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 TBC1D28Q2M2D7 210 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 PDZK1Q5T2W1 519 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 AGBL2Q5U5Z8 902 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 AP1ARQ63HQ0 302 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ZFAND6Q6FIF0 208 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 TMEM53Q6P2H8 277 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF627Q7L945 461 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 LINGO2Q7L985 606 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 CALHM3Q86XJ0 350 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 VRK2Q86Y07 508 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 KLBQ86Z14 1044 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SLC15A3Q8IY34 581 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ARFGAP2Q8N6H7 521 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 PNLDC1Q8NA58 520 aaKnown RBP4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ICA1LQ8NDH6 482 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 FBXO36Q8NEA4 188 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 MZB1Q8WU39 189 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ZBTB9Q96C00 473 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 LRR1Q96L50 414 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF75AQ96N20 296 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 WDFY2Q96P53 400 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 OXGR1Q96P68 337 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 TSPAN32Q96QS1 320 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 SDF2Q99470 211 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 ASCL2Q99929 193 aa4.25□□□□□ -1.73
CKAP4-203ENST00000553039 NPFFR1Q9GZQ6 430 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms