RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 MN1Q10571 1320 aaPredicted RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 ABCA4P78363 2273 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 FXYD6-FXYD2A0A087WZ82 144 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 A0A1B0GTQ1 180 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 C9J4A7 227 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 CCSO14618 274 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 OR2T1O43869 369 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 EIF4E2O60573 245 aaKnown RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 MPIG6BO95866 241 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 CD3DP04234 171 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 DBHP09172 617 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 QDPRP09417 244 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 GLI4P10075 376 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 PI3P19957 117 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 DNASE1P24855 282 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 LAP3P28838 519 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 RBMS1P29558 406 aaKnown RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 SELENOPP49908 381 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 GMFBP60983 142 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 DCAF7P61962 342 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 ACSM1Q08AH1 577 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 RAB11BQ15907 218 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 CCDC92Q53HC0 331 aaPredicted RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 GPR139Q6DWJ6 353 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 OR52W1Q6IF63 320 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 PXKQ7Z7A4 578 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 GVQW1Q8N7I0 195 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 OR11H4Q8NGC9 324 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 TNFAIP8L1Q8WVP5 186 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 TRIM63Q969Q1 353 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 TMEM41AQ96HV5 264 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 SEC22AQ96IW7 307 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 GUCD1Q96NT3 240 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 OR8B4Q96RC9 309 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 SELENOIQ9C0D9 397 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 FXYD6Q9H0Q3 95 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 SERINC1Q9NRX5 453 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 PRR13Q9NZ81 148 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 CKLFQ9UBR5 152 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 OR52A1Q9UKL2 312 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 MRPS18BQ9Y676 258 aaKnown RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 SHANK1Q9Y566 2161 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 NBEAQ8NFP9 2946 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 NSG1A0A0A6YYJ2 146 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 A0A0G2JMM0 328 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 A0A1W2PPB8 328 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 A0A1W2PRS3 328 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 KIR3DP1A8MWS1 328 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 H3BMH7 237 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PYCARD-AS1I3L0S3 204 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 AIPO00170 330 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 HCKP08631 526 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 TSPAN5P62079 268 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PITPNAQ00169 270 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 YIF1BQ5BJH7 314 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 BRICD5Q6PL45 260 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 TRILQ7L0X0 811 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF679Q8IYX0 411 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 FTMTQ8N4E7 242 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 AGBL5Q8NDL9 886 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 OR52N4Q8NGI2 321 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 OR5L2Q8NGL0 311 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 OR14L1PQ8NHC6 308 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 SLAMF6Q96DU3 332 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF837Q96EG3 531 aaPredicted RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 MVB12AQ96EY5 273 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 TINAGL1Q9GZM7 467 aaPredicted RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF768Q9H5H4 540 aaKnown RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 EXO5Q9H790 373 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 DIABLOQ9NR28 239 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 HPF1Q9NWY4 346 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ABRACLQ9P1F3 81 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 DKKL1Q9UK85 242 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ING4Q9UNL4 249 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 FOXJ3Q9UPW0 622 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 CAMK2AQ9UQM7 478 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PCDHGA9Q9Y5G4 932 aaKnown RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 TMEM14AQ9Y6G1 99 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 A0A1B0GVI7 797 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 OR5H15A6NDH6 313 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 C3orf80F5H4A9 247 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 TNFSF11O14788 317 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 KCNAB3O43448 404 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 GPRIN2O60269 458 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 AMY2AP04746 511 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 JMJD7P0C870 316 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 VAMP1P23763 118 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 SLC6A1P30531 599 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 EPHA4P54764 986 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 PSMA6P60900 246 aaKnown RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 BDH1Q02338 343 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 HSF2Q03933 536 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 TRAM1Q15629 374 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 UBE2NLQ5JXB2 153 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 SLC35D3Q5M8T2 416 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF704Q6ZNC4 412 aaPredicted RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 KCTD9Q7L273 389 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 RPS19BP1Q86WX3 136 aaKnown RBP4.99□□□□□ -1.61
LIMA1-215ENST00000552823 FOXRED2Q8IWF2 684 aa4.99□□□□□ -1.61
LIMA1-215ENST00000552823 ESX1Q8N693 406 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms