RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 RCC1P18754 421 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 EN2P19622 333 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ZBTB25P24278 435 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 SDHAP31040 664 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 IGFALSP35858 605 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 MAP3K8P41279 467 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ECH1Q13011 328 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 TDGQ13569 410 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 TMEM52BQ4KMG9 183 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 NKAPLQ5M9Q1 402 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 GLYATL3Q5SZD4 288 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ZNF425Q6IV72 752 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ABHD13Q7L211 337 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 MISPQ8IVT2 679 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 TMEM151BQ8IW70 566 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 BPIFB2Q8N4F0 458 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 EXD3Q8N9H8 876 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ZSCAN1Q8NBB4 408 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 OR9A4Q8NGU2 314 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 OR6N2Q8NGY6 317 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 OR2L8Q8NGY9 312 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 OR4C3Q8NH37 302 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 SLC22A8Q8TCC7 542 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 RLN3Q8WXF3 142 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 FGF14Q92915 247 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 SLC22A18Q96BI1 424 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 MRPL38Q96DV4 380 aaKnown RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 NECAB3Q96P71 396 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 IP6K3Q96PC2 410 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 NRIP2Q9BQI9 281 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ALX4Q9H161 411 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 TMEM100Q9NV29 134 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 RCC2Q9P258 522 aaKnown RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 LRIT1Q9P2V4 623 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 THAP10Q9P2Z0 257 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 KLF15Q9UIH9 416 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 DAPP1Q9UN19 280 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 RPH3AQ9Y2J0 694 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 CSAG2Q9Y5P2 127 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ETV7Q9Y603 341 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 MED12Q93074 2177 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 LOC101059948A0A1B0GTJ6 334 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 CXorf51AA0A1B0GTR3 108 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 PMS2P1A4D2B8 440 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ELOA3DA6NLF2 546 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 H0YGG7 62 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ZNF208O43345 1280 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 TXNL1O43396 289 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 OIP5O43482 229 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 FOXS1O43638 330 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ADAP1O75689 374 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 IGHV2-70P01814 119 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 SLC25A4P12235 298 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 AKR1C4P17516 323 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 PI3P19957 117 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 VAMP1P23763 118 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 NTSR1P30989 418 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 LPAR6P43657 344 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ARF3P61204 181 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 MFGE8Q08431 387 aaPredicted RBP4.37□□□□□ -1.71
LIMA1-214ENST00000552783 BIKQ13323 160 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 GPR18Q14330 331 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 PRICKLE4Q2TBC4 344 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ELOA3BQ3SY89 546 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 VWA2Q5GFL6 755 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 USP53Q70EK8 1073 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 FAM122BQ7Z309 247 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 NAA40Q86UY6 237 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ZNF227Q86WZ6 799 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 CSNK1A1LQ8N752 337 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 MFSD9Q8NBP5 474 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ACBD4Q8NC06 268 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ELOA3Q8NG57 546 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 OR2I1PQ8NGU4 316 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 ZNF563Q8TA94 476 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 C14orf79Q96F83 325 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 WDR92Q96MX6 357 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 C20orf24Q9BUV8 137 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 EDEM2Q9BV94 578 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 PLA2G2FQ9BZM2 168 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 OR2S2Q9NQN1 319 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 OR5AC2Q9NZP5 309 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 B9D1Q9UPM9 204 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 HEBP2Q9Y5Z4 205 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 KNTC1P50748 2209 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 RP1P56715 2156 aa4.37□□□□□ -1.71
LIMA1-214ENST00000552783 hCG_1809904A0A1W2PP81 198 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 A0A1W2PR64 198 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 A0A1W2PRV1 198 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 C9orf170A2RU37 121 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 METTL12A8MUP2 240 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 LY86O95711 162 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 ERCC1P07992 297 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SFTA3P0C7M3 94 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 IGFBP4P22692 258 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 AGTR1P30556 359 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 CD96P40200 585 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 FBXW4P57775 412 aa4.36□□□□□ -1.71
LIMA1-214ENST00000552783 RPS15AP62244 130 aaKnown RBP4.36□□□□□ -1.71
LIMA1-214ENST00000552783 SKP1P63208 163 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms