RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 DHDDSQ86SQ9 333 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 MOSPD2Q8NHP6 518 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 WFDC12Q8WWY7 111 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 TAF15Q92804 592 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 UPRTQ96BW1 309 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 TAMM41Q96BW9 452 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 MAGEB18Q96M61 343 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 SIGLEC11Q96RL6 698 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 CCT8L2Q96SF2 557 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 CCDC28BQ9BUN5 200 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 PARD6BQ9BYG5 372 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 TBCCD1Q9NVR7 557 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 WNK1Q9H4A3 2382 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 TRAV40A0A0B4J280 105 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 IGHV2-70DA0A0C4DH43 119 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 A0A1W2PPL8 197 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 C12orf71A8MTZ7 269 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 TMEM178BH3BS89 294 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 M0QZ24 198 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 HOXA3O43365 443 aaPredicted RBP11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 KITLGP21583 273 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 MSR1P21757 451 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 RAG2P55895 527 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 MTPNP58546 118 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 GNB2P62879 340 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 ALG10Q5BKT4 473 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 FAM205BPQ63HN1 556 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 SYT9Q86SS6 491 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 JAZF1Q86VZ6 243 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 TMEM255BQ8WV15 326 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 TMEM239Q8WW34 195 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 ITLN1Q8WWA0 313 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 LIPHQ8WWY8 451 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 PLEKHA8Q96JA3 519 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 COG8Q96MW5 612 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 C7orf26Q96N11 449 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 OR2V2Q96R30 315 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 WACQ9BTA9 647 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 POLR2J2Q9GZM3 115 aaKnown RBP11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 POLR2J3Q9H1A7 115 aaKnown RBP11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 MMP27Q9H306 513 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 RABEP2Q9H5N1 569 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 C20orf141Q9NUB4 165 aa11.9□□□□□ -0.5
CHMP1A-210ENST00000551981 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 SRRM5B3KS81 715 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 ANGPT2O15123 496 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 OR5F1O95221 314 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 WNT2P09544 360 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 TSPAN19P0C672 248 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 COX5BP10606 129 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 MMP16P51512 607 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 MAGOHP61326 146 aaKnown RBP11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 RPL27P61353 136 aaKnown RBP11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 PAX2Q02962 417 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 SLC27A4Q6P1M0 643 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 Q6ZR03 302 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 NKAIN4Q8IVV8 208 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 RAB40AQ8WXH6 277 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 CMBLQ96DG6 245 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 CGREF1Q99674 301 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 EBF4Q9BQW3 602 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 GCM1Q9NP62 436 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 PDP1Q9P0J1 537 aaPredicted RBP11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 MIOXQ9UGB7 285 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 SH3GLB1Q9Y371 365 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 NDUFAF1Q9Y375 327 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 MED31Q9Y3C7 131 aa11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 SOX21Q9Y651 276 aaPredicted RBP11.89□□□□□ -0.51
CHMP1A-210ENST00000551981 MDFIC2A0A1B0GVS7 189 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 A6NIZ1 184 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 LRRC30A6NM36 301 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 TIMM23O14925 209 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 RBMXP38159 391 aaKnown RBP11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 HTR5AP47898 357 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 BPIFB3P59826 476 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 RAP1BP61224 184 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 RAP1AP62834 184 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 GUCY1A3Q02108 690 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 SCRN3Q0VDG4 424 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 SELPLGQ14242 412 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 LAPTM4AQ15012 233 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 OLFML2AQ68BL7 652 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 FOXL2NBQ6ZUU3 175 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 NLRC3Q7RTR2 1065 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 KLBQ86Z14 1044 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 DPP10Q8N608 796 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 KIR3DL3Q8N743 410 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 POU5F2Q8N7G0 328 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 ATG16L2Q8NAA4 619 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 OR10S1Q8NGN2 331 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 HAVCR1Q96D42 359 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 NEIL1Q96FI4 390 aaPredicted RBP11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 POFUT1Q9H488 388 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 PRDM13Q9H4Q3 707 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 KAT8Q9H7Z6 458 aaKnown RBP11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 NOX4Q9NPH5 578 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 RIMS3Q9UJD0 308 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms