RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ABCD4O14678 606 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 DUSP14O95147 198 aaKnown RBP4.09□□□□□ -1.75
CPSF6-206ENST00000550987 OXSR1O95747 527 aaPredicted RBP4.09□□□□□ -1.75
CPSF6-206ENST00000550987 LALBAP00709 142 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 CD1BP29016 333 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 P2RY2P41231 377 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 MAP3K8P41279 467 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 SLC11A1P49279 550 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 HLCSP50747 726 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 SLC25A1P53007 311 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 PLK1P53350 603 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 DR1Q01658 176 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 DMC1Q14565 340 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 NCF4Q15080 339 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 CHRNA6Q15825 494 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 AANATQ16613 207 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 TIMM50Q3ZCQ8 353 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 HIGD2BQ4VC39 106 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 OLFML2AQ68BL7 652 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 UFSP1Q6NVU6 142 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 LRRC31Q6UY01 552 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 C16orf47Q6ZP98 133 aaPredicted RBP4.09□□□□□ -1.75
CPSF6-206ENST00000550987 RALGPS2Q86X27 583 aaPredicted RBP4.09□□□□□ -1.75
CPSF6-206ENST00000550987 DEFB119Q8N690 84 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 TSTD1Q8NFU3 115 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 RAB3IL1Q8TBN0 382 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 ING5Q8WYH8 240 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 ST8SIA1Q92185 356 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 SEC22AQ96IW7 307 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF641Q96N77 438 aaPredicted RBP4.09□□□□□ -1.75
CPSF6-206ENST00000550987 RNF2Q99496 336 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 MRPL37Q9BZE1 423 aaKnown RBP4.09□□□□□ -1.75
CPSF6-206ENST00000550987 AGPAT3Q9NRZ7 376 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF581Q9P0T4 197 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 SLC7A8Q9UHI5 535 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 PRELID1Q9Y255 219 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 UBIAD1Q9Y5Z9 338 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 TMEM131Q92545 1883 aa4.09□□□□□ -1.76
CPSF6-206ENST00000550987 TRAV6A0A075B6T7 132 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 A0A1B0GTQ1 180 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 A0A1W2PPR1 153 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 SMCO3A2RU48 225 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 CCDC182A6NF36 153 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 CHMP2AO43633 222 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 CYTH3O43739 400 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 UGT1A9O60656 530 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 PRPS2P11908 318 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 ATP1B2P14415 290 aaPredicted RBP4.08□□□□□ -1.76
CPSF6-206ENST00000550987 IL2RGP31785 369 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 UGT1A3P35503 534 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 SYKP43405 635 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 HAAOP46952 286 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 QARSP47897 775 aaKnown RBP4.08□□□□□ -1.76
CPSF6-206ENST00000550987 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
CPSF6-206ENST00000550987 CDK16Q00536 496 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 TLE4Q04727 773 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 ENPEPQ07075 957 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 BST2Q10589 180 aaKnown RBP4.08□□□□□ -1.76
CPSF6-206ENST00000550987 KLHL40Q2TBA0 621 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 NKAIN1Q4KMZ8 207 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 C1orf220Q5T0J3 134 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 ZNF658Q5TYW1 1059 aaPredicted RBP4.08□□□□□ -1.76
CPSF6-206ENST00000550987 MARC1Q5VT66 337 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 TMEM107Q6UX40 140 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 TRMT10CQ7L0Y3 403 aaKnown RBP4.08□□□□□ -1.76
CPSF6-206ENST00000550987 ZNF589Q86UQ0 364 aaPredicted RBP4.08□□□□□ -1.76
CPSF6-206ENST00000550987 OR2L13Q8N349 312 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 METTL13Q8N6R0 699 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 POM121L12Q8N7R1 296 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 OR52H1Q8NGJ2 320 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 OR1L6Q8NGR2 347 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 OR2A12Q8NGT7 310 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 OR9A1PQ8NGU1 263 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 SGMS2Q8NHU3 365 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 RHOXF1Q8NHV9 184 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 FAM81AQ8TBF8 368 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 PAQR8Q8TEZ7 354 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 PIBF1Q8WXW3 757 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 STARD8Q92502 1023 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 NUS1Q96E22 293 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 MAPKAP1Q9BPZ7 522 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 ZNF670Q9BS34 389 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 DPH7Q9BTV6 452 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 KRTAP4-5Q9BYR2 181 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 UBXN6Q9BZV1 441 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 PPA2Q9H2U2 334 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 RBKSQ9H477 322 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 NMRAL1Q9HBL8 299 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 IL26Q9NPH9 171 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 SDHAF3Q9NRP4 125 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 THUMPD1Q9NXG2 353 aaKnown RBP4.08□□□□□ -1.76
CPSF6-206ENST00000550987 CLEC5AQ9NY25 188 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 B3GNT2Q9NY97 397 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 OR1A1Q9P1Q5 309 aa4.08□□□□□ -1.76
CPSF6-206ENST00000550987 DOCK9Q9BZ29 2069 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 MYH6P13533 1939 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 IGKV6D-21A0A0A0MT36 114 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 A0A0D9SFI3 127 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 A0A1B0GWB2 263 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 DNALI1O14645 258 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms