RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TOP3AQ13472 1001 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-221ENST00000550914 ENDOGQ14249 297 aaKnown RBP10.84□□□□□ -0.67
PTCH1-221ENST00000550914 TTMPQ5BVD1 217 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 RABL3Q5HYI8 236 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 LRRC28Q86X40 367 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-221ENST00000550914 SIGLECL1Q8N7X8 197 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 FAM156AQ8NDB6 213 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 C22orf15Q8WYQ4 148 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 PRRC1Q96M27 445 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 COG8Q96MW5 612 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 NPHS2Q9NP85 383 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 IL19Q9UHD0 177 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 PCDHGB1Q9Y5G3 927 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 AUP1Q9Y679 476 aa10.84□□□□□ -0.67
PTCH1-221ENST00000550914 F5H0A9 414 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-221ENST00000550914 CLDN34H7C241 214 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 AHCYL1O43865 530 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 SHOX2O60902 331 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-221ENST00000550914 PPIAL4GP0DN37 164 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 IFI30P13284 250 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 OR1E2P47887 323 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 SLC9A3P48764 834 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 CTXN1P60606 82 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 BTG1P62324 171 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 CYBRD1Q53TN4 286 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 SPRNQ5BIV9 151 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 LRRC75AQ8NAA5 344 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 THOC1Q96FV9 657 aaKnown RBP10.83□□□□□ -0.68
PTCH1-221ENST00000550914 ZNF583Q96ND8 569 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 MRI1Q9BV20 369 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 POLE4Q9NR33 117 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 MMP26Q9NRE1 261 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 EGFL7Q9UHF1 273 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 A4GNTQ9UNA3 340 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 INSIG2Q9Y5U4 225 aa10.83□□□□□ -0.68
PTCH1-221ENST00000550914 WNK1Q9H4A3 2382 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 A0A1W2PPL8 197 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 DNAJC9-AS1A6NH13 148 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 BBIP1A8MTZ0 92 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 HMGB1P1B2RPK0 211 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-221ENST00000550914 TRAPPC2LH3BP13 241 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 J3QW42 95 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 PIP5K1CO60331 668 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 EDF1O60869 148 aaKnown RBP10.82□□□□□ -0.68
PTCH1-221ENST00000550914 KDELR2P33947 212 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 MDH2P40926 338 aaKnown RBP10.82□□□□□ -0.68
PTCH1-221ENST00000550914 SELENOWP63302 87 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 SCRN3Q0VDG4 424 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 FHL1Q13642 323 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 ZMYND11Q15326 602 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 KLF17Q5JT82 389 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-221ENST00000550914 ZNF771Q7L3S4 317 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-221ENST00000550914 OAFQ86UD1 273 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 RNF113BQ8IZP6 322 aaKnown RBP10.82□□□□□ -0.68
PTCH1-221ENST00000550914 OFCC1Q8IZS5 231 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 MUC20Q8N307 709 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-221ENST00000550914 CLDN22Q8N7P3 220 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 OR2Z1Q8NG97 314 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 C10orf82Q8WW14 230 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 HAVCR1Q96D42 359 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 SIGLEC11Q96RL6 698 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 DCLRE1CQ96SD1 692 aaKnown RBP10.82□□□□□ -0.68
PTCH1-221ENST00000550914 DCAF16Q9NXF7 216 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 ZNF69Q9UC07 566 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 IL20RAQ9UHF4 553 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 PPP1R3CQ9UQK1 317 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 LRCH1Q9Y2L9 728 aa10.82□□□□□ -0.68
PTCH1-221ENST00000550914 A0A0G2JND7 137 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 POM121CA8CG34 1229 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 FAM220BPB1ANY3 271 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 SGCEO43556 437 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 DOK2O60496 412 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 FSTL3O95633 263 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 RNASE1P07998 156 aaKnown RBP10.81□□□□□ -0.68
PTCH1-221ENST00000550914 HTR5AP47898 357 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 IL13RA1P78552 427 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 PRKCDQ05655 676 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 PAX8Q06710 450 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 LRRC23Q53EV4 343 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-221ENST00000550914 ESCO2Q56NI9 601 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 SLC27A4Q6P1M0 643 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 Q6ZR03 302 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 C9orf139Q6ZV77 190 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 IGFN1Q86VF2 1251 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 NRMQ8IXM6 262 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 OR51A7Q8NH64 312 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 LZICQ8WZA0 190 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 PTP4A1Q93096 173 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 SLC25A28Q96A46 364 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 C1orf147Q96MC9 270 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-221ENST00000550914 OR5V1Q9UGF6 321 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 ATPIF1Q9UII2 106 aa10.81□□□□□ -0.68
PTCH1-221ENST00000550914 CMYA5Q8N3K9 4069 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 TRAV27A0A087WT01 109 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 EFCAB9A8MZ26 197 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 TMEM178BH3BS89 294 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 XKRYO14609 159 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 MRASO14807 208 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 KCNAB3O43448 404 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 IFNW1P05000 195 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms