RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 RRM2BQ7LG56 351 aa19.5■□□□□ 0.71
SMARCD1-209ENST00000550477 OR2Z1Q8NG97 314 aa19.5■□□□□ 0.71
SMARCD1-209ENST00000550477 OR51A7Q8NH64 312 aa19.5■□□□□ 0.71
SMARCD1-209ENST00000550477 PATZ1Q9HBE1 687 aaKnown RBP19.5■□□□□ 0.71
SMARCD1-209ENST00000550477 GRHPRQ9UBQ7 328 aa19.5■□□□□ 0.71
SMARCD1-209ENST00000550477 FSHBP01225 129 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 HKR1P10072 659 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 SLC9A3P48764 834 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 ZNF154Q13106 437 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 RNF113BQ8IZP6 322 aaKnown RBP19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 MUC20Q8N307 709 aaPredicted RBP19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 OR2T12Q8NG77 320 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 ZNF583Q96ND8 569 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 ZNF747Q9BV97 191 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 ESM1Q9NQ30 184 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 POLE4Q9NR33 117 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 PLEK2Q9NYT0 353 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 IL19Q9UHD0 177 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 PPP1R3CQ9UQK1 317 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 AP3M1Q9Y2T2 418 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 POLR3KQ9Y2Y1 108 aaPredicted RBP19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 TANC2Q9HCD6 1990 aa19.49■□□□□ 0.71
SMARCD1-209ENST00000550477 EFCAB9A8MZ26 197 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 IFNL4K9M1U5 179 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 SGCEO43556 437 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 AHCYL1O43865 530 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 PIP5K1CO60331 668 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 DOK2O60496 412 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 CPT2P23786 658 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 PRTN3P24158 256 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 ZFP36P26651 326 aaKnown RBP19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 RPL4P36578 427 aaKnown RBP19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 HTR5AP47898 357 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 BTG1P62324 171 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 TRAM2Q15035 370 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 ESCO2Q56NI9 601 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 IGFN1Q86VF2 1251 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 LRRC28Q86X40 367 aaPredicted RBP19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 ZNF283Q8N7M2 679 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 CLDN22Q8N7P3 220 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 DVL3Q92997 716 aaPredicted RBP19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 PTP4A1Q93096 173 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 OR5V1Q9UGF6 321 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 A4GNTQ9UNA3 340 aa19.48■□□□□ 0.71
SMARCD1-209ENST00000550477 TRAV27A0A087WT01 109 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 FAM220BPB1ANY3 271 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 WIPF1O43516 503 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 IFNW1P05000 195 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 TROVE2P10155 538 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 KITLGP21583 273 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 SLC6A9P48067 706 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 PRKCDQ05655 676 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 ENDOGQ14249 297 aaKnown RBP19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 SLC27A4Q6P1M0 643 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 DOK3Q7L591 496 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 NRMQ8IXM6 262 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 MICU2Q8IYU8 434 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 SIGLECL1Q8N7X8 197 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 CMBLQ96DG6 245 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 TMEM120AQ9BXJ8 343 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 MS4A7Q9GZW8 240 aaPredicted RBP19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 PCDHGB1Q9Y5G3 927 aa19.47■□□□□ 0.71
SMARCD1-209ENST00000550477 ELOVL7A1L3X0 281 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 ZNF12P17014 697 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 MDH2P40926 338 aaKnown RBP19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 GUCY1A3Q02108 690 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 BAMBIQ13145 260 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 TMEM255AQ5JRV8 349 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 ZNF730Q6ZMV8 503 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 OFCC1Q8IZS5 231 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 LRRC75AQ8NAA5 344 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 DEFB108BQ8NET1 73 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 OR5L1Q8NGL2 311 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 SLC25A28Q96A46 364 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 IL20RAQ9UHF4 553 aa19.46■□□□□ 0.71
SMARCD1-209ENST00000550477 FXYD1O00168 92 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 MTNR1AP48039 350 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 RGS6P49758 472 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 AQP6Q13520 282 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 BTNL3Q6UXE8 466 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 HDXQ7Z353 690 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 ATG16L2Q8NAA4 619 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 HAVCR1Q96D42 359 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 ZNF696Q9H7X3 374 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 MMP26Q9NRE1 261 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 INSIG2Q9Y5U4 225 aa19.45■□□□□ 0.7
SMARCD1-209ENST00000550477 TENM1Q9UKZ4 2725 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 J3QW42 95 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 YAP1P46937 504 aaKnown RBP19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 KLF10Q13118 480 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 ZBED5Q49AG3 693 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 PRR31Q5SQ13 230 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 ITLN1Q8WWA0 313 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 ACOT11Q8WXI4 607 aaPredicted RBP19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 EMC7Q9NPA0 242 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 RHCGQ9UBD6 479 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 ZNF69Q9UC07 566 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 LRCH1Q9Y2L9 728 aa19.44■□□□□ 0.7
SMARCD1-209ENST00000550477 LOC100653049A0A140TA62 436 aa19.43■□□□□ 0.7
SMARCD1-209ENST00000550477 A8MXK9 166 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms