RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SMIM31A0A1B0GVY4 71 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 RPL36A-HNRNPH2H7BZ11 118 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 J3QLW9 94 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 HSMCR30P0CW71 290 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 OR8G3PP0DMU2 310 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 GABRA1P14867 456 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF823P16415 610 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ABOP16442 354 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 CPEP16870 476 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF19P17023 458 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 MSR1P21757 451 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 KIR2DL2P43627 348 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF84P51523 738 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 GTF2A1P52655 376 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 SIRPAP78324 504 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 MRPS34P82930 218 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ACSM1Q08AH1 577 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 FOXF2Q12947 444 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 EIF2B1Q14232 305 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 SGCAQ16586 387 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 GPR107Q5VW38 600 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 SLC18B1Q6NT16 456 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 VWA1Q6PCB0 445 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 GFRALQ6UXV0 394 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 TFAP2EQ6VUC0 442 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 TMPRSS11AQ6ZMR5 421 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 C3P1Q6ZMU1 363 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 CFAP77Q6ZQR2 320 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 PLEKHG7Q6ZR37 379 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 DCXRQ7Z4W1 244 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ATCAYQ86WG3 371 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 DOLPP1Q86YN1 238 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 KLBQ86Z14 1044 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 CLVS1Q8IUQ0 354 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 PHC2Q8IXK0 858 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 SYS1Q8N2H4 156 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 NAXEQ8NCW5 288 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 OR52N5Q8NH56 324 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 CPT1CQ8TCG5 803 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 THEM6Q8WUY1 208 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 APH1AQ96BI3 265 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 MAP6Q96JE9 813 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 FOXB1Q99853 325 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ABHD6Q9BV23 337 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 FUNDC2Q9BWH2 189 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF416Q9BWM5 594 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 RBM24Q9BX46 236 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 NELFAQ9H3P2 528 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 SEC61A2Q9H9S3 476 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 B3GAT2Q9NPZ5 323 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 GLRX2Q9NS18 164 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ACOXLQ9NUZ1 547 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 TMEM38BQ9NVV0 291 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 PARPBPQ9NWS1 579 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 SLCO1C1Q9NYB5 712 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 CYB5R1Q9UHQ9 305 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ST6GALNAC2Q9UJ37 374 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 SF3B6Q9Y3B4 125 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 GRIP1Q9Y3R0 1128 aa7.11□□□□□ -1.27
DEPDC4-207ENST00000549249 ATMQ13315 3056 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 MYO18BQ8IUG5 2567 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 PHYHO14832 338 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 TNFSF13O75888 250 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 MT-ND5P03915 603 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 ITGA5P08648 1049 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 B4GALT1P15291 398 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 CD36P16671 472 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 NR4A1P22736 598 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 GADD45AP24522 165 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 TTKP33981 857 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 PTGER4P35408 488 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 PSMB10P40306 273 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 OR3A2P47893 321 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 RGS6P49758 472 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 LSM6P62312 80 aaKnown RBP7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 ACTA2P62736 377 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 ACTG2P63267 376 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 BDH1Q02338 343 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 EGR3Q06889 387 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 TPBGQ13641 420 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 STK11Q15831 433 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 C9orf135Q5VTT2 229 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 KLHL24Q6TFL4 600 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 LRRN1Q6UXK5 716 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 C8orf86Q6ZUL3 223 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 FAM214BQ7L5A3 538 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 ANKRD13BQ86YJ7 626 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 OR10H5Q8NGA6 315 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 FGFBP3Q8TAT2 258 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 RPS4Y2Q8TD47 263 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 SNX33Q8WV41 574 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 ASB17Q8WXJ9 295 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 HSD17B8Q92506 261 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 RPL3LQ92901 407 aaKnown RBP7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 ISOC1Q96CN7 298 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 TRMT61AQ96FX7 289 aaKnown RBP7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 PSMG3-AS1Q96PY0 264 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 OR8B4Q96RC9 309 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 DOK1Q99704 481 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 TM9SF2Q99805 663 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms