RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 SLC36A2Q495M3 483 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 TMEM155Q4W5P6 130 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 TMEM255AQ5JRV8 349 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 GCNT6Q5T4J0 391 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 HIST2H2BDQ6DRA6 164 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 C1orf174Q8IYL3 243 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 BBS10Q8TAM1 723 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 LRTOMTQ8WZ04 291 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 MARS2Q96GW9 593 aaKnown RBP11.41□□□□□ -0.58
CDX2-202ENST00000548877 NR1H4Q96RI1 486 aaPredicted RBP11.41□□□□□ -0.58
CDX2-202ENST00000548877 SH3GL3Q99963 347 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 TMEM43Q9BTV4 400 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 MRI1Q9BV20 369 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 EGLN1Q9GZT9 426 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 TMEM38AQ9H6F2 299 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 A4GALTQ9NPC4 353 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 CYSLTR2Q9NS75 346 aa11.41□□□□□ -0.58
CDX2-202ENST00000548877 GMPR2Q9P2T1 348 aaKnown RBP11.41□□□□□ -0.58
CDX2-202ENST00000548877 DOCK11Q5JSL3 2073 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 A0A0B4J2E0 115 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 A0A1B0GX12 115 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 ISPDA4D126 451 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 H3BSA7 217 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 TIPRLO75663 272 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 PLATP00750 562 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 MT-ATP6P00846 226 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 MMP7P09237 267 aaPredicted RBP11.4□□□□□ -0.58
CDX2-202ENST00000548877 CPT2P23786 658 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 BIDP55957 195 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 LRRC36Q1X8D7 754 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 ZNF718Q3SXZ3 478 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 MBNL2Q5VZF2 373 aaKnown RBP11.4□□□□□ -0.58
CDX2-202ENST00000548877 LPCAT4Q643R3 524 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 DHRS4L2Q6PKH6 230 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 RHOUQ7L0Q8 258 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 COMTD1Q86VU5 262 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 SPICQ8N5J4 248 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 OR1J1Q8NGS3 322 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 OR5J2Q8NH18 312 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 TAF15Q92804 592 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDX2-202ENST00000548877 SLC25A44Q96H78 314 aaPredicted RBP11.4□□□□□ -0.58
CDX2-202ENST00000548877 DIRC2Q96SL1 478 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 CHID1Q9BWS9 393 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 MS4A7Q9GZW8 240 aaPredicted RBP11.4□□□□□ -0.58
CDX2-202ENST00000548877 OR51B6Q9H340 312 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 UBAP1Q9NZ09 502 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 ZDHHC8Q9ULC8 765 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 RAB26Q9ULW5 256 aa11.4□□□□□ -0.58
CDX2-202ENST00000548877 IQCMA0A1B0GVH7 501 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 ZSCAN5BA6NJL1 495 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 M0QZ24 198 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 SPRY3O43610 288 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 ICMTO60725 284 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 NDUFA7O95182 113 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 KNG1P01042 644 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 PGA4P0DJD7 388 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 PGA3P0DJD8 388 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 AHCYP23526 432 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 KDELR2P33947 212 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 ZNF133P52736 654 aaPredicted RBP11.39□□□□□ -0.59
CDX2-202ENST00000548877 PAX2Q02962 417 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 PLP2Q04941 152 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 HIST3H3Q16695 136 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 FBLN7Q53RD9 439 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 FAM205BPQ63HN1 556 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 LINC00114Q6XXX2 140 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 ZBTB49Q6ZSB9 765 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 SLC35D2Q76EJ3 337 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 SLC16A14Q7RTX9 510 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 LRRC28Q86X40 367 aaPredicted RBP11.39□□□□□ -0.59
CDX2-202ENST00000548877 KLHL36Q8N4N3 616 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 ZNF283Q8N7M2 679 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 OR4K5Q8NGD3 323 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 LZICQ8WZA0 190 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 ZNF566Q969W8 418 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 UPRTQ96BW1 309 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 PYURFQ96I23 114 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 SEPHS2Q99611 448 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 OSBPL10Q9BXB5 764 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 RNF121Q9H920 327 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 BEX1Q9HBH7 125 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 DNAJB9Q9UBS3 223 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 IL20RAQ9UHF4 553 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 BAG5Q9UL15 447 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 ANGPT4Q9Y264 503 aa11.39□□□□□ -0.59
CDX2-202ENST00000548877 PLSCR5A0PG75 271 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 LRRN3E7EW58 273 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 TIMM23O14925 209 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 SERPINA1P01009 418 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 NUDT7P0C024 238 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 ADORA3P0DMS8 318 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 IGHV4-38-2P0DP08 117 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 CD80P33681 288 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 GLO1Q04760 184 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 SRSF4Q08170 494 aaKnown RBP11.38□□□□□ -0.59
CDX2-202ENST00000548877 MED21Q13503 144 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 OR1Q1Q15612 314 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 UNQ6126/PRO20091Q6UXV3 157 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 C17orf107Q6ZR85 190 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 SPATC1Q76KD6 591 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms