RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 RANBP3Q9H6Z4 567 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 NOX3Q9HBY0 568 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 PRMT8Q9NR22 394 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 KLHL13Q9P2N7 655 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 MGAT4AQ9UM21 535 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 RPH3AQ9Y2J0 694 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 LOC107986453A0A1B0GWG9 222 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 H7C417 338 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 LMX1BO60663 402 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 FSTP19883 344 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 GUCA2AQ02747 115 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 OR13C3Q8NGS6 347 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 ELP5Q8TE02 316 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 C11orf40Q8WZ69 217 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 IER2Q9BTL4 223 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 DIABLOQ9NR28 239 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 CENPMQ9NSP4 180 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 CKLFQ9UBR5 152 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 MTFP1Q9UDX5 166 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 CDV3Q9UKY7 258 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 HHLA2Q9UM44 414 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 TMEM269A0A1B0GVZ9 245 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 A0A1W2PNR3 127 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 PATE3B3GLJ2 98 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 EIF1AYO14602 144 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 RBBP9O75884 186 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 TGM6O95932 706 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 HRGP04196 525 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 ISG15P05161 165 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 CELA2AP08217 269 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 RAD52P43351 418 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 P2RY4P51582 365 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 PCOLCEQ15113 449 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 SEZ6L2Q6UXD5 910 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 CDH24Q86UP0 819 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 WDSUB1Q8N9V3 476 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 ZNF431Q8TF32 576 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 MRPL13Q9BYD1 178 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 CGGBP1Q9UFW8 167 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 PCDHGA5Q9Y5G8 931 aa16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 MRPS18BQ9Y676 258 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-208ENST00000548436 TRAV18A0A075B6X5 111 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 PRAF2O60831 178 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 CD37P11049 281 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 PCGF3Q3KNV8 242 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 GLYATL3Q5SZD4 288 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 GLT8D1Q68CQ7 371 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 C3orf33Q6P1S2 294 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 CREB3L2Q70SY1 520 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 BPHLQ86WA6 291 aaPredicted RBP16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 RNF133Q8WVZ7 376 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 DLL4Q9NR61 685 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 EMC3Q9P0I2 261 aa16.52■□□□□ 0.24
PRPF40B-208ENST00000548436 A0A1B0GUH1 482 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 ZNF814B7Z6K7 855 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 ICMTO60725 284 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 H2BFMP0C1H6 154 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 ACHEP22303 614 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 HTR2CP28335 458 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 EIF1AXP47813 144 aaKnown RBP16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 SELENOPP49908 381 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 CAMK2DQ13557 499 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 SLC25A25Q6KCM7 469 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 DEGS2Q6QHC5 323 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 LUZP2Q86TE4 346 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 SEC22CQ9BRL7 303 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 SLC23A1Q9UHI7 598 aa16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 CHCHD2Q9Y6H1 151 aaPredicted RBP16.52■□□□□ 0.23
PRPF40B-208ENST00000548436 A0A1B0GVI7 797 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 DCDC2BA2VCK2 349 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 ANKRD34BA5PLL1 514 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 P2RY10O00398 339 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 ANXA7P20073 488 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 DNASE1L1P49184 302 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 SPOCK1Q08629 439 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 IL11RAQ14626 422 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 ANGPT1Q15389 498 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 PRAMEF20Q5VT98 475 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 METTL11BQ5VVY1 283 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 UEVLDQ8IX04 471 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 SNAPC3Q92966 411 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 RBP7Q96R05 134 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 OR5B2Q96R09 309 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 ATG5Q9H1Y0 275 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 WDR54Q9H977 334 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 SLC17A5Q9NRA2 495 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 CYB5R1Q9UHQ9 305 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 NPTNQ9Y639 398 aa16.51■□□□□ 0.23
PRPF40B-208ENST00000548436 MEIS3P1A6NDR6 274 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 C19orf67A6NJJ6 358 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 D6RAR5 112 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 NDUFB6O95139 128 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 HTR2BP41595 481 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 GLDNQ6ZMI3 551 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 ZNF704Q6ZNC4 412 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 FADS6Q8N9I5 356 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 OR4D10Q8NGI6 311 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 OR4C16Q8NGL9 310 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 OR10S1Q8NGN2 331 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms