RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 C4orf46Q504U0 113 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 ALKAL2Q6UX46 152 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 SLC25A45Q8N413 288 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 JAGN1Q8N5M9 183 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.39□□□□□ -0.11
CNOT2-209ENST00000548159 SLC38A9Q8NBW4 561 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 SLC26A10Q8NG04 563 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 OR13C3Q8NGS6 347 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 WBP1Q96G27 269 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 SLC41A2Q96JW4 573 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 EMC6Q9BV81 110 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 FXYD6Q9H0Q3 95 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 MED11Q9P086 117 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 LOC107986453A0A1B0GWG9 222 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 SMAD9O15198 467 aaKnown RBP14.39□□□□□ -0.11
CNOT2-209ENST00000548159 CD2P06729 351 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 ARRB1P49407 418 aaPredicted RBP14.39□□□□□ -0.11
CNOT2-209ENST00000548159 UBXN2BQ14CS0 331 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 GLT8D1Q68CQ7 371 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 PLXDC1Q8IUK5 500 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 ST7LQ8TDW4 575 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 TNFAIP8L1Q8WVP5 186 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 MARVELD3Q96A59 401 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 ZNF501Q96CX3 271 aaPredicted RBP14.39□□□□□ -0.11
CNOT2-209ENST00000548159 FOXQ1Q9C009 403 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 APMAPQ9HDC9 416 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 CENPMQ9NSP4 180 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 RDH8Q9NYR8 311 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 CKLFQ9UBR5 152 aa14.39□□□□□ -0.11
CNOT2-209ENST00000548159 TEX46H3BTG2 121 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 IGFBP4P22692 258 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 POU3F1Q03052 451 aaPredicted RBP14.38□□□□□ -0.11
CNOT2-209ENST00000548159 SMAD2Q15796 467 aaKnown RBP14.38□□□□□ -0.11
CNOT2-209ENST00000548159 COX15Q7KZN9 410 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 OR4D6Q8NGJ1 314 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 NKD1Q969G9 470 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 DHRS9Q9BPW9 319 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 TMPRSS13Q9BYE2 586 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 POFUT1Q9H488 388 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 ATXN7L1Q9ULK2 861 aaPredicted RBP14.38□□□□□ -0.11
CNOT2-209ENST00000548159 R4GMQ9 66 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 CNTRLQ7Z7A1 2325 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 COL5A1P20908 1838 aaPredicted RBP14.38□□□□□ -0.11
CNOT2-209ENST00000548159 TMEM269A0A1B0GVZ9 245 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 H3BML4 177 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 P2RY10O00398 339 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 OR2T1O43869 369 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 IGHMP01871 453 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 OPN1LWP04000 364 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 SRFP11831 508 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 CRABP1P29762 137 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 EIF1AXP47813 144 aaKnown RBP14.38□□□□□ -0.11
CNOT2-209ENST00000548159 NR0B2Q15466 257 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 IDO2Q6ZQW0 420 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 TMPRSS9Q7Z410 1059 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 TMED4Q7Z7H5 227 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 APCDD1LQ8NCL9 501 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 OR4S1Q8NGB4 309 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 STT3BQ8TCJ2 826 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 ASB10Q8WXI3 467 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 CXorf58Q96LI9 332 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 OR52A1Q9UKL2 312 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 HHLA2Q9UM44 414 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 RTTNQ86VV8 2226 aa14.38□□□□□ -0.11
CNOT2-209ENST00000548159 TMEM235A6NFC5 223 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 WIPF3A6NGB9 483 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 F5H5P2 479 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 DUX1O43812 170 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 RAB3DO95716 219 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 ZNF823P16415 610 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 ZNF28P17035 718 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 S100A11P31949 105 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 DNASE1L1P49184 302 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 MFSD13AQ14CX5 517 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 TMEM65Q6PI78 240 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 C17orf107Q6ZR85 190 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 TMUB2Q71RG4 321 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 ZNF248Q8NDW4 579 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 ARL6Q9H0F7 186 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 FARSAQ9Y285 508 aaKnown RBP14.37□□□□□ -0.11
CNOT2-209ENST00000548159 NUDT21O43809 227 aaKnown RBP14.37□□□□□ -0.11
CNOT2-209ENST00000548159 CSN2P05814 226 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 PTGS2P35354 604 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 C11orf88Q6PI97 169 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 ACBD4Q8NC06 268 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 COQ8AQ8NI60 647 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 CMBLQ96DG6 245 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 DMRTA2Q96SC8 542 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 SLC17A5Q9NRA2 495 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 ZNF230Q9UIE0 474 aaPredicted RBP14.37□□□□□ -0.11
CNOT2-209ENST00000548159 FBXO4Q9UKT5 387 aa14.37□□□□□ -0.11
CNOT2-209ENST00000548159 NPIPA5E9PKD4 350 aa14.36□□□□□ -0.11
CNOT2-209ENST00000548159 AMY2AP04746 511 aa14.36□□□□□ -0.11
CNOT2-209ENST00000548159 ITGB2P05107 769 aa14.36□□□□□ -0.11
CNOT2-209ENST00000548159 LPLP06858 475 aa14.36□□□□□ -0.11
CNOT2-209ENST00000548159 ACSM4P0C7M7 580 aa14.36□□□□□ -0.11
CNOT2-209ENST00000548159 GIMD1P0DJR0 217 aa14.36□□□□□ -0.11
CNOT2-209ENST00000548159 LIPCP11150 499 aa14.36□□□□□ -0.11
CNOT2-209ENST00000548159 BCKDHBP21953 392 aa14.36□□□□□ -0.11
CNOT2-209ENST00000548159 TSSK4Q6SA08 328 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms