RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ERVS71-1P61550 626 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 FLOT2Q14254 428 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 MOGQ16653 247 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 NKPD1Q17RQ9 610 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 MICAQ29983 383 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 ARL9Q6T311 187 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 ZNF101Q8IZC7 436 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 ZCCHC24Q8N2G6 241 aaKnown RBP13.63□□□□□ -0.23
DDX54-204ENST00000546898 AQP11Q8NBQ7 271 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 OR4K13Q8NH42 304 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 SNX33Q8WV41 574 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 FOXN4Q96NZ1 517 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 NMNAT3Q96T66 252 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 DGCR6LQ9BY27 220 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 TPK1Q9H3S4 243 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 EGLN3Q9H6Z9 239 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 ELOVL3Q9HB03 270 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 VNN3Q9NY84 501 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 ATPIF1Q9UII2 106 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.63□□□□□ -0.234e-8■■■■□ 25.5
DDX54-204ENST00000546898 BHLHE40O14503 412 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 TLX2O43763 284 aaPredicted RBP13.62□□□□□ -0.23
DDX54-204ENST00000546898 CST1P01037 141 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 GASTP01350 101 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 GAAP10253 952 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 USF1P22415 310 aaPredicted RBP13.62□□□□□ -0.23
DDX54-204ENST00000546898 GIFP27352 417 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 NR4A2P43354 598 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 PPP2R2BQ00005 443 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 GLO1Q04760 184 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 MAD2L1BPQ15013 274 aaPredicted RBP13.62□□□□□ -0.23
DDX54-204ENST00000546898 CARTPTQ16568 116 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 TMEM249Q2WGJ8 235 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 ZNF718Q3SXZ3 478 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 ZBTB46Q86UZ6 589 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 ZNF786Q8N393 782 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 ICA1LQ8NDH6 482 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 UBASH3BQ8TF42 649 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 TSSK2Q96PF2 358 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 CHID1Q9BWS9 393 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 PLEK2Q9NYT0 353 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 TAAR3PQ9P1P4 343 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 ASH2LQ9UBL3 628 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 B9D1Q9UPM9 204 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 POLR1DQ9Y2S0 133 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 U3KQV3 271 aa13.62□□□□□ -0.23
DDX54-204ENST00000546898 ARRDC5A6NEK1 342 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 DCTN6O00399 190 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 CLPTM1O96005 669 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 IGHV3-13P01766 116 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 MT-ND5P03915 603 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 TUBG1P23258 451 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 GCH1P30793 250 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 HTR5AP47898 357 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 ARHGDIAP52565 204 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX54-204ENST00000546898 PPP1R8Q12972 351 aaKnown RBP13.61□□□□□ -0.23
DDX54-204ENST00000546898 SLC36A3Q495N2 470 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 CLEC12AQ5QGZ9 265 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 MBNL2Q5VZF2 373 aaKnown RBP13.61□□□□□ -0.23
DDX54-204ENST00000546898 RFPL4BQ6ZWI9 263 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 VASH1Q7L8A9 365 aaPredicted RBP13.61□□□□□ -0.23
DDX54-204ENST00000546898 NPEPL1Q8NDH3 523 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 SDR9C7Q8NEX9 313 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 OR10G2Q8NGC3 310 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 ABHD4Q8TB40 342 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 CANT1Q8WVQ1 401 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 C4orf45Q96LM5 186 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 PLA2G12AQ9BZM1 189 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 YY1AP1Q9H869 796 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 RPRD1BQ9NQG5 326 aaKnown RBP13.61□□□□□ -0.23
DDX54-204ENST00000546898 TUBG2Q9NRH3 451 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 TBC1D23Q9NUY8 699 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 CGGBP1Q9UFW8 167 aaPredicted RBP13.61□□□□□ -0.23
DDX54-204ENST00000546898 BAIAP2Q9UQB8 552 aa13.61□□□□□ -0.23
DDX54-204ENST00000546898 OR6C6A6NF89 314 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 C17orf100A8MU93 164 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 J3QW42 95 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 ABHD16AO95870 558 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 CENPAP49450 140 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 RASSF2P50749 326 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 PPP1CBP62140 327 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 COX10Q12887 443 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 BNIP1Q12981 228 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 PCGF3Q3KNV8 242 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 TMEM154Q6P9G4 183 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 CD300LDQ6UXZ3 194 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 SPATA24Q86W54 205 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 OR6V1Q8N148 313 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 GJC3Q8NFK1 279 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 SLC26A10Q8NG04 563 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 OR52E2Q8NGJ4 325 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 OR8D4Q8NGM9 314 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 SLC25A40Q8TBP6 338 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 MARS2Q96GW9 593 aaKnown RBP13.6□□□□□ -0.23
DDX54-204ENST00000546898 COG8Q96MW5 612 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 DCLRE1CQ96SD1 692 aaKnown RBP13.6□□□□□ -0.23
DDX54-204ENST00000546898 BPESC1Q9GZL8 116 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 HDHD2Q9H0R4 259 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 SRA1Q9HD15 236 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms