RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 MAFIPQ8WZ33 124 aa14.18□□□□□ -0.14
CUX1-211ENST00000546411 TXNIPQ9H3M7 391 aa14.18□□□□□ -0.14
CUX1-211ENST00000546411 FRG2CA6NGY1 282 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 OIP5O43482 229 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 CT45A8P0DMV1 189 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 CT45A9P0DMV2 189 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 TBXA2RP21731 343 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 CT45A2Q5DJT8 189 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 NPSR1Q6W5P4 371 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 RPS19BP1Q86WX3 136 aaKnown RBP14.17□□□□□ -0.14
CUX1-211ENST00000546411 MISPQ8IVT2 679 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 SLC22A18ASQ8N1D0 253 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 FOXRED1Q96CU9 486 aaPredicted RBP14.17□□□□□ -0.14
CUX1-211ENST00000546411 ST6GAL2Q96JF0 529 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 PRELID1Q9Y255 219 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 UBE2J1Q9Y385 318 aaPredicted RBP14.17□□□□□ -0.14
CUX1-211ENST00000546411 IGHV1OR21-1A0A087WYE8 117 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 TMEM221A6NGB7 291 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 LILRA5A6NI73 299 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 SCGNO76038 276 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 IGKV1D-16P01601 117 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 CD53P19397 219 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 RFC3P40938 356 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 MFAP5Q13361 173 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 ADGRE4PQ86SQ3 457 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 TEX19Q8NA77 164 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 NECAB3Q96P71 396 aaPredicted RBP14.17□□□□□ -0.14
CUX1-211ENST00000546411 PRSS27Q9BQR3 290 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 CHST11Q9NPF2 352 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 KCNE5Q9UJ90 142 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 ZNF780AO75290 641 aaPredicted RBP14.17□□□□□ -0.14
CUX1-211ENST00000546411 HOXB9P17482 250 aaPredicted RBP14.17□□□□□ -0.14
CUX1-211ENST00000546411 BTN1A1Q13410 526 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 MEF2DQ14814 521 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 WDR38Q5JTN6 314 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 SLC22A24Q8N4F4 322 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 OR10AC1Q8NH08 325 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 CD300LFQ8TDQ1 290 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 ARPC3O15145 178 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 FBXO24O75426 580 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 IGHV4-34P06331 123 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 PNLIPRP2P54317 469 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 GUSBP11Q6P575 273 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 C17orf107Q6ZR85 190 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 OR10A2Q9H208 303 aa14.17□□□□□ -0.14
CUX1-211ENST00000546411 LSM2Q9Y333 95 aaKnown RBP14.17□□□□□ -0.14
CUX1-211ENST00000546411 ICE1Q9Y2F5 2266 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 C4orf47A7E2U8 309 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 FOXS1O43638 330 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 SSR4P51571 173 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 AAED1Q7RTV5 226 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 FAM71CQ8NEG0 241 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 OR1N1Q8NGS0 311 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 PAQR8Q8TEZ7 354 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 MVB12AQ96EY5 273 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 POFUT1Q9H488 388 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 KCNS2Q9ULS6 477 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 SDCBPO00560 298 aaPredicted RBP14.16□□□□□ -0.14
CUX1-211ENST00000546411 CTLA4P16410 223 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 HAGHLQ6PII5 290 aaPredicted RBP14.16□□□□□ -0.14
CUX1-211ENST00000546411 DOCK8Q8NF50 2099 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 AICDAQ9GZX7 198 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 GPR171O14626 319 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 STK17BO94768 372 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 UBCP0CG48 685 aaKnown RBP14.16□□□□□ -0.14
CUX1-211ENST00000546411 CAV2P51636 162 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 GAB4Q2WGN9 574 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 SLC16A14Q7RTX9 510 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 OR4S1Q8NGB4 309 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 OR4C16Q8NGL9 310 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 OR52N5Q8NH56 324 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 JAM3Q9BX67 310 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 CLEC1BQ9P126 229 aa14.16□□□□□ -0.14
CUX1-211ENST00000546411 ROS1P08922 2347 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 DSPPQ9NZW4 1301 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 TNFSF12O43508 249 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 RAF1P04049 648 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 GUSBP08236 651 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 PET100P0DJ07 73 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 PVALBP20472 110 aaPredicted RBP14.15□□□□□ -0.14
CUX1-211ENST00000546411 EXOSC6Q5RKV6 272 aaKnown RBP14.15□□□□□ -0.14
CUX1-211ENST00000546411 BEND4Q6ZU67 534 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 TSPAN32Q96QS1 320 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 PILRAQ9UKJ1 303 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 TRAV1-2A0A0B4J238 106 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 STMND1H3BQB6 276 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 IGHA1P01876 353 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 APOBEC1P41238 236 aaKnown RBP14.15□□□□□ -0.14
CUX1-211ENST00000546411 MAP2K6P52564 334 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 DOC2BQ14184 412 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 EMC4Q5J8M3 183 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 LIX1LQ8IVB5 337 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 NPEPL1Q8NDH3 523 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 OTOSQ8NHW6 89 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 ARL5BQ96KC2 179 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 GPR84Q9NQS5 396 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 PCDHB16Q9NRJ7 776 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 PCOLCE2Q9UKZ9 415 aa14.15□□□□□ -0.14
CUX1-211ENST00000546411 HRH3Q9Y5N1 445 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms