RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 MPIG6BO95866 241 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 AGR2O95994 175 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 DRD1P21728 446 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 HRH1P35367 487 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 CAPZA2P47755 286 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 ACSM1Q08AH1 577 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 MLC1Q15049 377 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 TMEM151BQ8IW70 566 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 OR2I1PQ8NGU4 316 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 TSLPQ969D9 159 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 CCDC74AQ96AQ1 378 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 DPYSL5Q9BPU6 564 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 FOXQ1Q9C009 403 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 SHARPINQ9H0F6 387 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 HEBP2Q9Y5Z4 205 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 SGCEO43556 437 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 GALR3O60755 368 aaPredicted RBP13.23□□□□□ -0.29
HOXC11-202ENST00000546378 ERCC1P07992 297 aaPredicted RBP13.23□□□□□ -0.29
HOXC11-202ENST00000546378 SNRNP70P08621 437 aaKnown RBP13.23□□□□□ -0.29
HOXC11-202ENST00000546378 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 FOSL2P15408 326 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 MST1P26927 711 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 PPT1P50897 306 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 BDH1Q02338 343 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 PDZD11Q5EBL8 140 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 NPSR1Q6W5P4 371 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 CLRN3Q8NCR9 226 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 FGGYQ96C11 551 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 JAM3Q9BX67 310 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 LMAN1LQ9HAT1 526 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 FANCFQ9NPI8 374 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 EXOSC3Q9NQT5 275 aaKnown RBP13.23□□□□□ -0.29
HOXC11-202ENST00000546378 COA3Q9Y2R0 106 aaPredicted RBP13.23□□□□□ -0.29
HOXC11-202ENST00000546378 CSAG2Q9Y5P2 127 aa13.23□□□□□ -0.29
HOXC11-202ENST00000546378 C17orf105B2RV13 164 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 GLCEO94923 617 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 RAB6AP20340 208 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 IL11P20809 199 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 SNRPEP62304 92 aaKnown RBP13.22□□□□□ -0.29
HOXC11-202ENST00000546378 POU4F2Q12837 409 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 CSRP2Q16527 193 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 PTCRAQ6ISU1 281 aaPredicted RBP13.22□□□□□ -0.29
HOXC11-202ENST00000546378 RNF113BQ8IZP6 322 aaKnown RBP13.22□□□□□ -0.29
HOXC11-202ENST00000546378 PRSS35Q8N3Z0 413 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 OR5M9Q8NGP3 310 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 OR1J4Q8NGS1 313 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 MRPL48Q96GC5 212 aaKnown RBP13.22□□□□□ -0.29
HOXC11-202ENST00000546378 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.22□□□□□ -0.29
HOXC11-202ENST00000546378 LRRK1Q38SD2 2015 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 OGG1O15527 345 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 ZNF208O43345 1280 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 CD2P06729 351 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 NPBWR1P48145 328 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 ZNF616Q08AN1 781 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 NFATC4Q14934 902 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 SLC37A2Q8TED4 501 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 KIF25Q9UIL4 384 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 PCNX3Q9H6A9 2034 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 COL4A3Q01955 1670 aa13.22□□□□□ -0.29
HOXC11-202ENST00000546378 ICE1Q9Y2F5 2266 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 SERINC4A6NH21 518 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 ABCD4O14678 606 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 PDZK1IP1Q13113 114 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 FAM69BQ5VUD6 431 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 RBMS3Q6XE24 437 aaKnown RBP13.21□□□□□ -0.29
HOXC11-202ENST00000546378 Q6ZSR6 202 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 BCORP1Q8N888 145 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 PNPLA2Q96AD5 504 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 SPSB2Q99619 263 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 MAP3K3Q99759 626 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 RAB11FIP5Q9BXF6 653 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 NXF5Q9H1B4 397 aaKnown RBP13.21□□□□□ -0.29
HOXC11-202ENST00000546378 TLNRD1Q9H1K6 362 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 MRPS18BQ9Y676 258 aaKnown RBP13.21□□□□□ -0.29
HOXC11-202ENST00000546378 A0A0A6YYH2 397 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 A6NJ64 397 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 TGFBR3LH3BV60 316 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 SPP1P10451 314 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 ADH6P28332 368 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 CD80P33681 288 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 SNU13P55769 128 aaKnown RBP13.21□□□□□ -0.29
HOXC11-202ENST00000546378 SNTB1Q13884 538 aaKnown RBP13.21□□□□□ -0.29
HOXC11-202ENST00000546378 NKAPLQ5M9Q1 402 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 HLA-DQA1Q5Y7H0 255 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 RPL13AP3Q6NVV1 102 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 TAAR8Q969N4 342 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 USB1Q9BQ65 265 aaKnown RBP13.21□□□□□ -0.29
HOXC11-202ENST00000546378 PHF7Q9BWX1 381 aaPredicted RBP13.21□□□□□ -0.29
HOXC11-202ENST00000546378 TEX101Q9BY14 249 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 POTEKPQ9BYX7 375 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 TBL1XR1Q9BZK7 514 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 RTN4RQ9BZR6 473 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 PTGES2Q9H7Z7 377 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 INPP5EQ9NRR6 644 aa13.21□□□□□ -0.29
HOXC11-202ENST00000546378 ZNF701Q9NV72 531 aaPredicted RBP13.21□□□□□ -0.29
HOXC11-202ENST00000546378 H7C417 338 aa13.21□□□□□ -0.3
HOXC11-202ENST00000546378 GABRG2P18507 467 aa13.21□□□□□ -0.3
HOXC11-202ENST00000546378 HTR2CP28335 458 aa13.21□□□□□ -0.3
HOXC11-202ENST00000546378 SERPINF1P36955 418 aa13.21□□□□□ -0.3
HOXC11-202ENST00000546378 MESTQ5EB52 335 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms