RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ABCA1O95477 2261 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 C5orf49A4QMS7 147 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 OR6C68A6NDL8 312 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 SMAD7O15105 426 aaKnown RBP10.19□□□□□ -0.78
YBX3-217ENST00000546164 LY6G6DO95868 133 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 TP53P04637 393 aaPredicted RBP10.19□□□□□ -0.78
YBX3-217ENST00000546164 ERCC1P07992 297 aaPredicted RBP10.19□□□□□ -0.78
YBX3-217ENST00000546164 SLC25A16P16260 332 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 WNT5AP41221 380 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 HIST1H3AP68431 136 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 GLO1Q04760 184 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 CLEC12AQ5QGZ9 265 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 ZNF362Q5T0B9 420 aaPredicted RBP10.19□□□□□ -0.78
YBX3-217ENST00000546164 HIST2H3PS2Q5TEC6 136 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 ZNF774Q6NX45 483 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 CLEC9AQ6UXN8 241 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 HIST2H3AQ71DI3 136 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 ZNF101Q8IZC7 436 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 NPEPL1Q8NDH3 523 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 SLC26A10Q8NG04 563 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 GIPC3Q8TF64 312 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 C11orf40Q8WZ69 217 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 FAM168AQ92567 244 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 TSSK2Q96PF2 358 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 SYT3Q9BQG1 590 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 EIF3KQ9UBQ5 218 aaKnown RBP10.19□□□□□ -0.78
YBX3-217ENST00000546164 BAIAP2Q9UQB8 552 aa10.19□□□□□ -0.78
YBX3-217ENST00000546164 OR6C6A6NF89 314 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 VWC2LB2RUY7 222 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 H3BSA7 217 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 SGCEO43556 437 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 FKBP6O75344 327 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 LY6HO94772 140 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 MPZL1O95297 269 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 LCKP06239 509 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 ADRA2AP08913 450 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 CCNOP22674 350 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 PDLIM4P50479 330 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 KLF3P57682 345 aaPredicted RBP10.18□□□□□ -0.78
YBX3-217ENST00000546164 SELENOVP59797 346 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 KRTAP1-1Q07627 177 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.18□□□□□ -0.78
YBX3-217ENST00000546164 VASH1Q7L8A9 365 aaPredicted RBP10.18□□□□□ -0.78
YBX3-217ENST00000546164 LRP11Q86VZ4 500 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 SDR9C7Q8NEX9 313 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 OR2T33Q8NG76 320 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 OR52E2Q8NGJ4 325 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 SYNPRQ8TBG9 265 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 SLCO4A1Q96BD0 722 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 FOXN4Q96NZ1 517 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 FEVQ99581 238 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 TSSK6Q9BXA6 273 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 RERGLQ9H628 205 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 RPRD1BQ9NQG5 326 aaKnown RBP10.18□□□□□ -0.78
YBX3-217ENST00000546164 SLCO1C1Q9NYB5 712 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 MYEF2Q9P2K5 600 aaKnown RBP10.18□□□□□ -0.78
YBX3-217ENST00000546164 ASH2LQ9UBL3 628 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 DNAJB9Q9UBS3 223 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 REV1Q9UBZ9 1251 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 DUSP13Q9UII6 198 aa10.18□□□□□ -0.78
YBX3-217ENST00000546164 SONP18583 2426 aaKnown RBP10.18□□□□□ -0.78
YBX3-217ENST00000546164 A0A1W2PPW3 197 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 LOC390937A0A1W2PQ73 354 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 GNGT2O14610 69 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 DOK2O60496 412 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 IGHV3-13P01766 116 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 TFP02787 698 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 TUBG1P23258 451 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 ERVS71-1P61550 626 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 CBX1P83916 185 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 LOXL1Q08397 574 aaPredicted RBP10.17□□□□□ -0.78
YBX3-217ENST00000546164 MOGQ16653 247 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 SLC36A3Q495N2 470 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 CCDC92Q53HC0 331 aaPredicted RBP10.17□□□□□ -0.78
YBX3-217ENST00000546164 SLC35F1Q5T1Q4 408 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 MBNL2Q5VZF2 373 aaKnown RBP10.17□□□□□ -0.78
YBX3-217ENST00000546164 ARL9Q6T311 187 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 RFPL4BQ6ZWI9 263 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 TMEM179BQ7Z7N9 219 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 ZCCHC24Q8N2G6 241 aaKnown RBP10.17□□□□□ -0.78
YBX3-217ENST00000546164 GJC3Q8NFK1 279 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 OR1J1Q8NGS3 322 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 OR4Q3Q8NH05 313 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 MARS2Q96GW9 593 aaKnown RBP10.17□□□□□ -0.78
YBX3-217ENST00000546164 C4orf45Q96LM5 186 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 NIPSNAP1Q9BPW8 284 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 RBM4Q9BWF3 364 aaKnown RBP10.17□□□□□ -0.78
YBX3-217ENST00000546164 OR51B6Q9H340 312 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 ELOVL3Q9HB03 270 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 SRA1Q9HD15 236 aaKnown RBP10.17□□□□□ -0.78
YBX3-217ENST00000546164 TUBG2Q9NRH3 451 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 TBC1D23Q9NUY8 699 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 TBCCD1Q9NVR7 557 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 PLEK2Q9NYT0 353 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 GPR160Q9UJ42 338 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 KCNG2Q9UJ96 466 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 KLHL21Q9UJP4 597 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 FZR1Q9UM11 496 aa10.17□□□□□ -0.78
YBX3-217ENST00000546164 LHFPL6Q9Y693 200 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms