RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CAB39Q9Y376 341 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 TIMM10BQ9Y5J6 103 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 LHFPL6Q9Y693 200 aa14.04□□□□□ -0.16
PRPF40A-212ENST00000545856 DAPL1A0PJW8 107 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 TVP23AA6NH52 213 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 OR5H1A6NKK0 313 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 FAM171A2A8MVW0 826 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 MYL12BO14950 172 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 SELENOFO60613 162 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 PTHP01270 115 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 SPARCP09486 303 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 TACSTD2P09758 323 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 IL32P24001 234 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 NAA10P41227 235 aaPredicted RBP14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 UBE2NP61088 152 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 ENDOGQ14249 297 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 IRF3Q14653 427 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 RAB35Q15286 201 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 BHLHA15Q7RTS1 189 aaPredicted RBP14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 TSPAN14Q8NG11 270 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 OR52N5Q8NH56 324 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 ST7LQ8TDW4 575 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 CA5BP1Q8WTZ4 195 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 RNF133Q8WVZ7 376 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 RNASE6Q93091 150 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 MROQ9BYG7 248 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 PAK1IP1Q9NWT1 392 aaPredicted RBP14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 ERVK13-1Q9NX77 482 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 ASH2LQ9UBL3 628 aa14.03□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF878C9JN71 531 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 PRB1P04280 392 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 RPSAP08865 295 aaKnown RBP14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 MRPL3P09001 348 aaKnown RBP14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 MMP7P09237 267 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 CDAP32320 146 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 UQCRFS1P47985 274 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 BDH1Q02338 343 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 IGFBP7Q16270 282 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 CDONQ4KMG0 1287 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 ZNF322Q6U7Q0 402 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 STAC2Q6ZMT1 411 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 FAM220AQ7Z4H9 259 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 CXorf67Q86X51 503 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 ZNF679Q8IYX0 411 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 KLHL36Q8N4N3 616 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 COQ7Q99807 217 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 ABHD6Q9BV23 337 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 KCNJ16Q9NPI9 418 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 SLC17A5Q9NRA2 495 aa14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 GDF2Q9UK05 429 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 USP9XQ93008 2570 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-212ENST00000545856 LRRK2Q5S007 2527 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 A0A1W2PQL4 384 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 C16orf97H3BN30 126 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 KRT8P05787 483 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 LIMS3P0CW19 117 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 LIMS4P0CW20 117 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 TAS2R43P59537 309 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 GRB2P62993 217 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 ACSM1Q08AH1 577 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 EIF2B1Q14232 305 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 ZNF544Q6NX49 715 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 DCXRQ7Z4W1 244 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 LUZP2Q86TE4 346 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 LIX1LQ8IVB5 337 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 SKA3Q8IX90 412 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 SNX33Q8WV41 574 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 HSD17B8Q92506 261 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 ITFG2Q969R8 447 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 OR8B4Q96RC9 309 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 DCLRE1CQ96SD1 692 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 ZNF649Q9BS31 505 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 ALG8Q9BVK2 526 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 MRPS26Q9BYN8 205 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 EMC7Q9NPA0 242 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 ISYNA1Q9NPH2 558 aa14.01□□□□□ -0.17
PRPF40A-212ENST00000545856 ACOD1A6NK06 481 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 J3QW42 95 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 SGCEO43556 437 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 LYZL6O75951 148 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 MPZL1O95297 269 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 CLDN14O95500 239 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 MT-ND5P03915 603 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 HTR1AP08908 422 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 C21orf33P30042 268 aaPredicted RBP14□□□□□ -0.17
PRPF40A-212ENST00000545856 WNT4P56705 351 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 PLP2Q04941 152 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 MEP1BQ16820 701 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 GSG1Q2KHT4 349 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 CCDC58Q4VC31 144 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 ELFN2Q5R3F8 820 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 LYPD4Q6UWN0 246 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 B3GLCTQ6Y288 498 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 NANOGP1Q8N7R0 232 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 IL17RDQ8NFM7 739 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 MUCL1Q96DR8 90 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 SLAMF6Q96DU3 332 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 OR2H1Q9GZK4 316 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 CCDC90BQ9GZT6 254 aa14□□□□□ -0.17
PRPF40A-212ENST00000545856 MOB1AQ9H8S9 216 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms