RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 VDAC3Q9Y277 283 aa15.84■□□□□ 0.13
SCARB1-208ENST00000544327 HRH3Q9Y5N1 445 aa15.84■□□□□ 0.13
SCARB1-208ENST00000544327 IGKV1D-43A0A0B4J1Z2 117 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 LOC107986453A0A1B0GWG9 222 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 CPED1A4D0V7 1026 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 RAD1O60671 282 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 SNAPC5O75971 98 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 DKK1O94907 266 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 KDM4BO94953 1096 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 AKAIN1P0CW23 69 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 MMP16P51512 607 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 CAPZA1P52907 286 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 SLC36A1Q7Z2H8 476 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 NKAIN3Q8N8D7 197 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 OR13C3Q8NGS6 347 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 OR2T35Q8NGX2 323 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 OR6N1Q8NGY5 312 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 PIGKQ92643 395 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 CCDC74BQ96LY2 380 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 CMKLR1Q99788 373 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 MRPL13Q9BYD1 178 aaKnown RBP15.83■□□□□ 0.12
SCARB1-208ENST00000544327 SCPEP1Q9HB40 452 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 SERINC1Q9NRX5 453 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 KLRF1Q9NZS2 232 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 PIPOXQ9P0Z9 390 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 B3GAT1Q9P2W7 334 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 RPH3AQ9Y2J0 694 aaPredicted RBP15.83■□□□□ 0.12
SCARB1-208ENST00000544327 WIF1Q9Y5W5 379 aa15.83■□□□□ 0.12
SCARB1-208ENST00000544327 CCDC163A0A0D9SF12 145 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 OR2A4O95047 310 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 MELTFP08582 738 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 ANXA7P20073 488 aaKnown RBP15.82■□□□□ 0.12
SCARB1-208ENST00000544327 HOXA6P31267 233 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 DNASE1L1P49184 302 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 FAM198BQ6UWH4 519 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 ADGRE4PQ86SQ3 457 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 PLPP7Q8NBV4 271 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 CLEC1AQ8NC01 280 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 SLC22A8Q8TCC7 542 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 C5orf34Q96MH7 638 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 OR2A7Q96R45 310 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 MED29Q9NX70 200 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 MGAT4CQ9UBM8 478 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 RHBDD3Q9Y3P4 386 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 TNRC6BQ9UPQ9 1833 aaKnown RBP15.82■□□□□ 0.12
SCARB1-208ENST00000544327 EYSQ5T1H1 3165 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 OR2M5A3KFT3 312 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 SIGLEC6O43699 453 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 DOK2O60496 412 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 SLC22A5O76082 557 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 DCNP07585 359 aaKnown RBP15.82■□□□□ 0.12
SCARB1-208ENST00000544327 ACTBP60709 375 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 ACTG1P63261 375 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 CSRP2Q16527 193 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 ZNF239Q16600 458 aaKnown RBP15.82■□□□□ 0.12
SCARB1-208ENST00000544327 BPHLQ86WA6 291 aaPredicted RBP15.82■□□□□ 0.12
SCARB1-208ENST00000544327 ZNF680Q8NEM1 530 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 C11orf40Q8WZ69 217 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 PMEPA1Q969W9 287 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 FOXRED1Q96CU9 486 aaPredicted RBP15.82■□□□□ 0.12
SCARB1-208ENST00000544327 CRB3Q9BUF7 120 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 ATG5Q9H1Y0 275 aa15.82■□□□□ 0.12
SCARB1-208ENST00000544327 ZNF107Q9UII5 783 aaPredicted RBP15.82■□□□□ 0.12
SCARB1-208ENST00000544327 FREM3P0C091 2139 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 TMEM269A0A1B0GVZ9 245 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 PYCARD-AS1I3L0S3 204 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 TSC22D2O75157 780 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 H2BFMP0C1H6 154 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 VSIG10L2P0DP72 767 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 P2RY4P51582 365 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 BIDP55957 195 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 RAP2BP61225 183 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 MYBPHQ13203 477 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 GLYATL3Q5SZD4 288 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 THEM4Q5T1C6 240 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 MRPL14Q6P1L8 145 aaKnown RBP15.81■□□□□ 0.12
SCARB1-208ENST00000544327 PPP1R3BQ86XI6 285 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 LINC00346Q8IVM7 164 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 CDH26Q8IXH8 852 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 MEIOBQ8N635 442 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 UXS1Q8NBZ7 420 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 RELTQ969Z4 430 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 RBP7Q96R05 134 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 SLCO5A1Q9H2Y9 848 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 KCNK15Q9H427 330 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 FAM206AQ9NX38 181 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 ZNF69Q9UC07 566 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 SIT1Q9Y3P8 196 aa15.81■□□□□ 0.12
SCARB1-208ENST00000544327 MRPS18BQ9Y676 258 aaKnown RBP15.81■□□□□ 0.12
SCARB1-208ENST00000544327 LINC00862A6NCI5 91 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 LPLP06858 475 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 RAB6AP20340 208 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 DHPSP49366 369 aaPredicted RBP15.8■□□□□ 0.12
SCARB1-208ENST00000544327 GUCA2AQ02747 115 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 C3orf33Q6P1S2 294 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 LRFN4Q6PJG9 635 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 TMEM229BQ8NBD8 167 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 OR2M3Q8NG83 312 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 OR10G3Q8NGC4 313 aa15.8■□□□□ 0.12
SCARB1-208ENST00000544327 NAT6Q93015 286 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms