RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	TAS2R5	Q9NYW4	299 aa		13.51	□□□□□ -0.25
CHFR-223	ENST00000544268	MMACHC	Q9Y4U1	282 aa		13.51	□□□□□ -0.25
CHFR-223	ENST00000544268	IGKV3D-11	A0A0A0MRZ8	115 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	TMEM72	A0PK05	275 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	SCRG1	O75711	98 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	ZFPL1	O95159	310 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	SERPINA3	P01011	423 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	OR2T7	P0C7T2	308 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	DIO1	P49895	249 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	PLA2G7	Q13093	441 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	ZNF626	Q68DY1	528 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	TMEM88	Q6PEY1	159 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	ZNF550	Q7Z398	422 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	OR2T27	Q8NH04	317 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	RXFP3	Q9NSD7	469 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	NPFFR2	Q9Y5X5	522 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	CELSR3	Q9NYQ7	3312 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	IL5	P05113	134 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	APEH	P13798	732 aa	Known RBP	13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	SOX2	P48431	317 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	ACTC1	P68032	377 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	ACTA1	P68133	377 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	FUT7	Q11130	342 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	KLHL26	Q53HC5	615 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	FAAP20	Q6NZ36	180 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	LRRN1	Q6UXK5	716 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	PGAP1	Q75T13	922 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	LDLRAD3	Q86YD5	345 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	OR14A16	Q8NHC5	309 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	GAL3ST4	Q96RP7	486 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	ADO	Q96SZ5	270 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	PTDSS2	Q9BVG9	487 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	BARX1	Q9HBU1	254 aa	Predicted RBP	13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	NOX3	Q9HBY0	568 aa		13.5	□□□□□ -0.25
CHFR-223	ENST00000544268	TMEM82	A0PJX8	343 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	DISC1	C4P0D8	188 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	FLRT2	O43155	660 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	S100A8	P05109	93 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	S100A9	P06702	114 aa	Known RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	KCNJ3	P48549	501 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	TAS2R43	P59537	309 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	SLC6A19	Q695T7	634 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	NHLRC1	Q6VVB1	395 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	SHISA6	Q6ZSJ9	500 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	RHOU	Q7L0Q8	258 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	CMTM4	Q8IZR5	234 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	SVBP	Q8N300	66 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	RELL2	Q8NC24	303 aa	Predicted RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	OR10AC1	Q8NH08	325 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	TSNAX	Q99598	290 aa	Known RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	CMSS1	Q9BQ75	279 aa	Known RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ALG12	Q9BV10	488 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	WNT5B	Q9H1J7	359 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	MYEF2	Q9P2K5	600 aa	Known RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	CUL9	Q8IWT3	2517 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	NUP210L	Q5VU65	1888 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	FXYD6-FXYD2	A0A087WZ82	144 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	SULT1C2	O00338	296 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	CDX4	O14627	284 aa	Predicted RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	SPDEF	O95238	335 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	IGF2	P01344	180 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	HEXB	P07686	556 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	UCHL1	P09936	223 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	SPP1	P10451	314 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ACP1	P24666	158 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	DLX5	P56178	289 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	RPS4X	P62701	263 aa	Known RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ZFP36L1	Q07352	338 aa	Known RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	SSPN	Q14714	243 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ELOA3B	Q3SY89	546 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	UQCC3	Q6UW78	93 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	DPY19L2P2	Q6ZN68	376 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	PPP1R3B	Q86XI6	285 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	PUSL1	Q8N0Z8	303 aa	Known RBP	13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ELOA3	Q8NG57	546 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ZNF671	Q8TAW3	534 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	THEM6	Q8WUY1	208 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	G6PC3	Q9BUM1	346 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ULBP3	Q9BZM4	244 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	NMNAT2	Q9BZQ4	307 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	VN1R1	Q9GZP7	353 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	FXYD6	Q9H0Q3	95 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	PLEKHA1	Q9HB21	404 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	RASL12	Q9NYN1	266 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ABRACL	Q9P1F3	81 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	OPN4	Q9UHM6	478 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	RCE1	Q9Y256	329 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	ZNF337	Q9Y3M9	751 aa		13.49	□□□□□ -0.25
CHFR-223	ENST00000544268	KIF26B	Q2KJY2	2108 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	EFCAB7	A8K855	629 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	SRM	P19623	302 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	GALNS	P34059	522 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	GPR143	P51810	404 aa		13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	NR0B1	P51843	470 aa	Known RBP	13.48	□□□□□ -0.25
CHFR-223	ENST00000544268	CTXN1	P60606	82 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms