RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 TTC33Q6PID6 262 aaPredicted RBP4.51□□□□□ -1.69
CLIP1-217ENST00000543205 C5orf46Q6UWT4 87 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 PLXDC2Q6UX71 529 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ZBTB49Q6ZSB9 765 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 NCCRP1Q6ZVX7 275 aaPredicted RBP4.51□□□□□ -1.69
CLIP1-217ENST00000543205 GDF7Q7Z4P5 450 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ADGRE4PQ86SQ3 457 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 AQP12AQ8IXF9 295 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 RPRMLQ8N4K4 120 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 MARVELD2Q8N4S9 558 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 FAM86B1Q8N7N1 296 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 TSPAN14Q8NG11 270 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 FNDC9Q8TBE3 224 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 NSMAFQ92636 917 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 FAM46BQ96A09 425 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 DNAJA3Q96EY1 480 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 C14orf79Q96F83 325 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ARL5BQ96KC2 179 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 SEPHS2Q99611 448 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 EPYCQ99645 322 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 SRXN1Q9BYN0 137 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 PPIL3Q9H2H8 161 aaKnown RBP4.51□□□□□ -1.69
CLIP1-217ENST00000543205 CLCF1Q9UBD9 225 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 RIMS3Q9UJD0 308 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 TRAPPC4Q9Y296 219 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ENPP4Q9Y6X5 453 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 SVILO95425 2214 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF407Q9C0G0 2248 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 TRAV36DV7A0A075B6V5 113 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 A0A0G2JNJ9 132 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ANKRD61A6NGH8 418 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 TRIM77I1YAP6 450 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 LGALS8O00214 317 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ACOT8O14734 319 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 CTDSPLO15194 276 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 OR2T1O43869 369 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 CIDEAO60543 219 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 EIF1BO60739 113 aaKnown RBP4.51□□□□□ -1.69
CLIP1-217ENST00000543205 TOX4O94842 621 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 TGM6O95932 706 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 KNG1P01042 644 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 PTNP21246 168 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 RPS5P46782 204 aaKnown RBP4.51□□□□□ -1.69
CLIP1-217ENST00000543205 LOXL3P58215 753 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 CHRNB3Q05901 458 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ALKBH1Q13686 389 aaKnown RBP4.51□□□□□ -1.69
CLIP1-217ENST00000543205 OR7A5Q15622 319 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF239Q16600 458 aaKnown RBP4.51□□□□□ -1.69
CLIP1-217ENST00000543205 SMN1Q16637 294 aaKnown RBP4.51□□□□□ -1.69
CLIP1-217ENST00000543205 C1orf146Q5VVC0 180 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 OR2A2Q6IF42 318 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 CORO6Q6QEF8 472 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF813Q6ZN06 617 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ASRGL1Q7L266 308 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 FCRLAQ7L513 359 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 SLC43A2Q8N370 569 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 C9orf106Q8NAJ2 232 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ASB5Q8WWX0 329 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 SLC25A36Q96CQ1 311 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ZFP3Q96NJ6 502 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 TMEM43Q9BTV4 400 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 NDUFA13Q9P0J0 144 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 RHCGQ9UBD6 479 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 Q9UFV3 132 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 SLC7A8Q9UHI5 535 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 POMPQ9Y244 141 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 MAB21L2Q9Y586 359 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 PCNX3Q9H6A9 2034 aa4.51□□□□□ -1.69
CLIP1-217ENST00000543205 ITPR3Q14573 2671 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 HEATR5AQ86XA9 2040 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 FREM3P0C091 2139 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 IGKV1D-42A0A075B6H8 117 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 IGHV3-15A0A0B4J1V0 119 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 NPIPB11E5RHQ5 1161 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 KPNA4O00629 521 aaPredicted RBP4.5□□□□□ -1.69
CLIP1-217ENST00000543205 AKAP8O43823 692 aaKnown RBP4.5□□□□□ -1.69
CLIP1-217ENST00000543205 ZG16O60844 167 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 NPIPB7O75200 414 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 AQP8O94778 261 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 TOXO94900 526 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 RCBTB2O95199 551 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 LYPD3O95274 346 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 THY1P04216 161 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 SEMG1P04279 462 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 HEXAP06865 529 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 H1F0P07305 194 aaKnown RBP4.5□□□□□ -1.69
CLIP1-217ENST00000543205 UMPSP11172 480 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 CHRNB4P30926 498 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 CEACAM8P31997 349 aaPredicted RBP4.5□□□□□ -1.69
CLIP1-217ENST00000543205 OPRM1P35372 400 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 RBM34P42696 430 aaKnown RBP4.5□□□□□ -1.69
CLIP1-217ENST00000543205 MAGEB1P43366 347 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 RPS6KA3P51812 740 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 CTBP2P56545 445 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 SMIM11AP58511 58 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 VLDLRP98155 873 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 EGR4Q05215 589 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 MFSD13AQ14CX5 517 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 TRAM2Q15035 370 aa4.5□□□□□ -1.69
CLIP1-217ENST00000543205 CDONQ4KMG0 1287 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms