RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 OR4F15Q8NGB8 312 aa14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 OR1J2Q8NGS2 313 aa14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 CDADC1Q9BWV3 514 aa14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 MARCH7Q9H992 704 aa14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 RNPEPL1Q9HAU8 725 aa14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 CISD1Q9NZ45 108 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 CYB5R1Q9UHQ9 305 aa14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 ATP23Q9Y6H3 246 aa14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 COMMD3-BMI1R4GMX3 469 aa14.82□□□□□ -0.04
RABGGTA-203ENST00000543002 E7EQL1 145 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 RER1O15258 196 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 COX5BP10606 129 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 STOMP27105 288 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 GSTT1P30711 240 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 CDC42P60953 191 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 HGFACQ04756 655 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 TBC1D28Q2M2D7 210 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 CCDC92Q53HC0 331 aaPredicted RBP14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 TEX30Q5JUR7 227 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 SLC18B1Q6NT16 456 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 B3GLCTQ6Y288 498 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 ZNF611Q8N823 705 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 OR8J1Q8NGP2 316 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 OR2AJ1Q8NGZ0 328 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 NRGNQ92686 78 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 FBXW5Q969U6 566 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 POM121L2Q96KW2 1035 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 IL4I1Q96RQ9 567 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 PITX2Q99697 317 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 LIME1Q9H400 295 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 WDR76Q9H967 626 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 CDH20Q9HBT6 801 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 SMPD3Q9NY59 655 aaPredicted RBP14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 PLEK2Q9NYT0 353 aa14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 NDRG4Q9ULP0 352 aaKnown RBP14.81□□□□□ -0.04
RABGGTA-203ENST00000543002 SPG11Q96JI7 2443 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 LOC100509620A0A075B734 347 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 DLGAP1O14490 977 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 DOK2O60496 412 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 TMCC2O75069 709 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 CCL2P13500 99 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 ENTPD1P49961 510 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 GDI2P50395 445 aaKnown RBP14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 APOFQ13790 326 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 RAB35Q15286 201 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 PCK2Q16822 640 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 AADACL4Q5VUY2 407 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 NXNL2Q5VZ03 156 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 CORO6Q6QEF8 472 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 C20orf204Q6ZNR8 217 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 VASH1Q7L8A9 365 aaPredicted RBP14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 LINC00346Q8IVM7 164 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 NUP37Q8NFH4 326 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 FAM81AQ8TBF8 368 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 TRUB1Q8WWH5 349 aaKnown RBP14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 ZMYND19Q96E35 227 aaPredicted RBP14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 INTS14Q96SY0 518 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 DHRS9Q9BPW9 319 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 FAM118AQ9NWS6 357 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 GDF2Q9UK05 429 aaPredicted RBP14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 EDARQ9UNE0 448 aa14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 RAI1Q7Z5J4 1906 aaPredicted RBP14.8□□□□□ -0.04
RABGGTA-203ENST00000543002 AKAP6Q13023 2319 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 PLCE1Q9P212 2302 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 LRBAP50851 2863 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 CCDC182A6NF36 153 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 OR6C6A6NF89 314 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 ZNF593O00488 134 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 SLC16A6O15403 523 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 SYNGR3O43761 229 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 RRP9O43818 475 aaKnown RBP14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 NR4A1P22736 598 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 HTR5AP47898 357 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 RPS7P62081 194 aaKnown RBP14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 NKX6-1P78426 367 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 GALK2Q01415 458 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 ELFN2Q5R3F8 820 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 ZNF544Q6NX49 715 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 PAMR1Q6UXH9 720 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 CFAP77Q6ZQR2 320 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 BCDIN3DQ7Z5W3 292 aaKnown RBP14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 TIGD4Q8IY51 512 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 PAQR4Q8N4S7 273 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 TEAD3Q99594 435 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 HDHD2Q9H0R4 259 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 IMPAD1Q9NX62 359 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 H2AFY2Q9P0M6 372 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 ATPIF1Q9UII2 106 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 SPEF1Q9Y4P9 236 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 GMPPBQ9Y5P6 360 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 RTTNQ86VV8 2226 aa14.79□□□□□ -0.04
RABGGTA-203ENST00000543002 NOTCH2Q04721 2471 aa14.78□□□□□ -0.04
RABGGTA-203ENST00000543002 LOC100130705A0A1B0GUX0 176 aa14.78□□□□□ -0.04
RABGGTA-203ENST00000543002 C5orf49A4QMS7 147 aa14.78□□□□□ -0.04
RABGGTA-203ENST00000543002 CYSRT1A8MQ03 144 aa14.78□□□□□ -0.04
RABGGTA-203ENST00000543002 SPARCP09486 303 aa14.78□□□□□ -0.04
RABGGTA-203ENST00000543002 PSKH1P11801 424 aa14.78□□□□□ -0.04
RABGGTA-203ENST00000543002 PCSK6P29122 969 aa14.78□□□□□ -0.04
RABGGTA-203ENST00000543002 RPS27P42677 84 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-203ENST00000543002 SNTB2Q13425 540 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms