RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 OR2T27Q8NH04 317 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 FGFBP3Q8TAT2 258 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 OR2H1Q9GZK4 316 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 CNOT2Q9NZN8 540 aaKnown RBP20.16■□□□□ 0.82
HOMER3-205ENST00000542541 LAMP5Q9UJQ1 280 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 GDF2Q9UK05 429 aaPredicted RBP20.16■□□□□ 0.82
HOMER3-205ENST00000542541 TPRKBQ9Y3C4 175 aa20.16■□□□□ 0.82
HOMER3-205ENST00000542541 EFCAB10A6NFE3 127 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 RPS27P42677 84 aaKnown RBP20.15■□□□□ 0.82
HOMER3-205ENST00000542541 SLC15A1P46059 708 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 HIST1H3AP68431 136 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 EIF2B1Q14232 305 aaKnown RBP20.15■□□□□ 0.82
HOMER3-205ENST00000542541 RBM48Q5RL73 367 aaKnown RBP20.15■□□□□ 0.82
HOMER3-205ENST00000542541 HIST2H3PS2Q5TEC6 136 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 CORO6Q6QEF8 472 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 HIST2H3AQ71DI3 136 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 DCXRQ7Z4W1 244 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 MDP1Q86V88 176 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 OR4F15Q8NGB8 312 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 DACH2Q96NX9 599 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 BLOC1S6Q9UL45 172 aa20.15■□□□□ 0.82
HOMER3-205ENST00000542541 ZNF503-AS2A6NEH8 195 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 SLC1A7O00341 560 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 PHYHO14832 338 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 RER1O15258 196 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 SGCEO43556 437 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 XPNPEP2O43895 674 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 PTHP01270 115 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 ACTC1P68032 377 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 ACTA1P68133 377 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 PSG4Q00888 419 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 PABPC1L2AQ5JQF8 200 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 ZNF540Q8NDQ6 660 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 THEM6Q8WUY1 208 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 ASB17Q8WXJ9 295 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 ZC3HAV1LQ96H79 300 aaKnown RBP20.14■□□□□ 0.81
HOMER3-205ENST00000542541 SLC24A3Q9HC58 644 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 PLEK2Q9NYT0 353 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 PSORS1C1Q9UIG5 152 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 LRCH1Q9Y2L9 728 aa20.14■□□□□ 0.81
HOMER3-205ENST00000542541 CACNA1CQ13936 2221 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 IQCMA0A1B0GVH7 501 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 APOL3O95236 402 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 LYNP07948 512 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 PIPP12273 146 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-205ENST00000542541 ALOX5APP20292 161 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 ALKBH2Q6NS38 261 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 C22orf34Q6ZV56 151 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 RHOUQ7L0Q8 258 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 ACBD7Q8N6N7 88 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 OR10H4Q8NGA5 316 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 LINC01560Q8TB33 94 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 GGHQ92820 318 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 MYCBPQ99417 103 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-205ENST00000542541 ABHD6Q9BV23 337 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 YTHDF1Q9BYJ9 559 aaKnown RBP20.13■□□□□ 0.81
HOMER3-205ENST00000542541 PRSS44E7EML9 344 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 ZNF670-ZNF695F2Z2N8 137 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 CASKO14936 926 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 IGKV3-15P01624 115 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 DCKP27707 260 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 KIR2DL3P43628 341 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 HCCSP53701 268 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 RAB35Q15286 201 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 C3orf36Q3SXR2 165 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 ELFN2Q5R3F8 820 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 TMEM154Q6P9G4 183 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 KCTD18Q6PI47 426 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-205ENST00000542541 WFDC8Q8IUA0 241 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 MAP6Q96JE9 813 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 C1QTNF6Q9BXI9 259 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 HDHD2Q9H0R4 259 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 WNT5BQ9H1J7 359 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 FGF20Q9NP95 211 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-205ENST00000542541 CRNNQ9UBG3 495 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-205ENST00000542541 PCDHGB5Q9Y5G0 923 aa20.13■□□□□ 0.81
HOMER3-205ENST00000542541 DOK2O60496 412 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 SERPINA5P05154 406 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 THBDP07204 575 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 PSKH1P11801 424 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 ECH1Q13011 328 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 SNTB1Q13884 538 aaKnown RBP20.12■□□□□ 0.81
HOMER3-205ENST00000542541 CFAP77Q6ZQR2 320 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 DMRTC2Q8IXT2 367 aaPredicted RBP20.12■□□□□ 0.81
HOMER3-205ENST00000542541 OR52I1Q8NGK6 324 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 AKR7LQ8NHP1 331 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 ST7LQ8TDW4 575 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 SMAP2Q8WU79 429 aaPredicted RBP20.12■□□□□ 0.81
HOMER3-205ENST00000542541 IPCEF1Q8WWN9 437 aaPredicted RBP20.12■□□□□ 0.81
HOMER3-205ENST00000542541 MYDGFQ969H8 173 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 TMEM80Q96HE8 168 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 NOX3Q9HBY0 568 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 INPP5EQ9NRR6 644 aa20.12■□□□□ 0.81
HOMER3-205ENST00000542541 LRRK2Q5S007 2527 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 DAPL1A0PJW8 107 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 PTGES3LE9PB15 166 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 C19orf84I3L1E1 186 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 J3QRE1 110 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 COX5BP10606 129 aa20.11■□□□□ 0.81
HOMER3-205ENST00000542541 IGFBP2P18065 325 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms