RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PTGDR2Q9Y5Y4 395 aa4.74□□□□□ -1.65
DDB1-219ENST00000541513 TICRRQ7Z2Z1 1910 aa4.74□□□□□ -1.65
DDB1-219ENST00000541513 ZDBF2Q9HCK1 2354 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 NUP205Q92621 2012 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 CHD5Q8TDI0 1954 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ATG2BQ96BY7 2078 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TECTAO75443 2155 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 COL4A2P08572 1712 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 NPIPA5A0A0B4J1W7 369 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 LOC101059948A0A1B0GTJ6 334 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 A0A1B0GVG6 124 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ZNF729A6NN14 1252 aaPredicted RBP4.73□□□□□ -1.65
DDB1-219ENST00000541513 LOC730098B7Z3J9 87 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TMEM238C9JI98 176 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 E5RJQ4 531 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 NPIPA5E9PKD4 350 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 AQP9O43315 295 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 XPNPEP2O43895 674 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 EIF4E2O60573 245 aaKnown RBP4.73□□□□□ -1.65
DDB1-219ENST00000541513 SERPINB7O75635 380 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 C1orf105O95561 183 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 OAS1P00973 400 aaKnown RBP4.73□□□□□ -1.65
DDB1-219ENST00000541513 CALB1P05937 261 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TACSTD2P09758 323 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ICAM2P13598 275 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 MYOD1P15172 320 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 IL9P15248 144 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 IDSP22304 550 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 DTYMKP23919 212 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 OR1E1P30953 314 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 FOXN2P32314 431 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 MAGEA6P43360 314 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 DNA2P51530 1060 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 SLURP1P55000 103 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 MLF1P58340 268 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 RPL27P61353 136 aaKnown RBP4.73□□□□□ -1.65
DDB1-219ENST00000541513 AP1S1P61966 158 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 SLC7A9P82251 487 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ID2Q02363 134 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TEAD2Q15562 447 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 UBE2V2Q15819 145 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 DGUOKQ16854 277 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 PGGHGQ32M88 737 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 NDUFAF6Q330K2 333 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 SLC36A2Q495M3 483 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 DMRTC1Q5HYR2 192 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TPRG1LQ5T0D9 272 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 RAD9BQ6WBX8 426 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 MBOAT1Q6ZNC8 495 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TTLL10Q6ZVT0 673 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TMEM25Q86YD3 366 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 BBS7Q8IWZ6 715 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 PDIK1LQ8N165 341 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 MS4A15Q8N5U1 240 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TMEM156Q8N614 296 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ZNF738Q8NE65 137 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 OR6X1Q8NH79 312 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ITFG1Q8TB96 612 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 CNIH3Q8TBE1 160 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 KCTD4Q8WVF5 259 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 TFGQ92734 400 aaPredicted RBP4.73□□□□□ -1.65
DDB1-219ENST00000541513 RORBQ92753 470 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 FGF13Q92913 245 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 IL12RB2Q99665 862 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ATP5SQ99766 215 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ZNF426Q9BUY5 554 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 PIGUQ9H490 435 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 NHEJ1Q9H9Q4 299 aaPredicted RBP4.73□□□□□ -1.65
DDB1-219ENST00000541513 CAB39LQ9H9S4 337 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 NMUR1Q9HB89 426 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 ABCC13Q9NSE7 274 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 GID8Q9NWU2 228 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 PPP4R1LQ9P1A2 415 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 SLC7A7Q9UM01 511 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 MRPS28Q9Y2Q9 187 aaKnown RBP4.73□□□□□ -1.65
DDB1-219ENST00000541513 V9GYY9 64 aa4.73□□□□□ -1.65
DDB1-219ENST00000541513 KIAA1549LQ6ZVL6 1849 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 TRAV19A0A0A6YYK7 116 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 A0A0J9YVX5 310 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 SAGE2PA6NJ88 616 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ANHXE9PGG2 379 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ATP6V1G2-DDX39BF2Z307 99 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 M0QXV9 152 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 SYF2O95926 243 aaKnown RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 CD160O95971 181 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 LMO1P25800 156 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ACRV1P26436 265 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 HLA-DMAP28067 261 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 GNPDA1P46926 289 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 RAG2P55895 527 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ATP6V0D1P61421 351 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 MRPS22P82650 360 aaKnown RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 HTR4Q13639 388 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 PSG5Q15238 335 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ADNP2Q6IQ32 1131 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 SLC25A47Q6Q0C1 308 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 PARM1Q6UWI2 310 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 Q6ZSV7 163 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 FAM183BPQ6ZVS7 135 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 PGAP1Q75T13 922 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms