RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 PARGQ86W56 976 aa13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 ZNF595Q8IYB9 648 aa13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 NKD1Q969G9 470 aa13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 FOXRED1Q96CU9 486 aaPredicted RBP13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 OR51M1Q9H341 326 aa13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 FGF22Q9HCT0 170 aa13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 MKKSQ9NPJ1 570 aaPredicted RBP13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 PRMT8Q9NR22 394 aaPredicted RBP13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 LAMP5Q9UJQ1 280 aa13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 PCOLCE2Q9UKZ9 415 aa13.39□□□□□ -0.27
AC005840.4-201ENST00000541242 TBC1D3DA0A087WVF3 549 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 TBC1D3IA0A087WXS9 549 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 C9orf170A2RU37 121 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 MSGN1A6NI15 193 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 TBC1D3LB9A6J9 549 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 IGHV2-70P01814 119 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 TBC1D3HP0C7X1 549 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 ID4P47928 161 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 CXADRP78310 365 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 WDR38Q5JTN6 314 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 OR52W1Q6IF63 320 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 TBC1D3CQ6IPX1 549 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 TBC1D3Q8IZP1 549 aaPredicted RBP13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 GVQW1Q8N7I0 195 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 MCHR2Q969V1 340 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 ISOC2Q96AB3 205 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 EDEM2Q9BV94 578 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 SEBOXQ9HB31 216 aaPredicted RBP13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 SLC22A13Q9Y226 551 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 POM121BA6NF01 834 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 F8VVB4 439 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 F8VWA3 439 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 IGKV1D-16P01601 117 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 CPT2P23786 658 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 RBM34P42696 430 aaKnown RBP13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 DLX2Q07687 328 aaPredicted RBP13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 LINC00114Q6XXX2 140 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 JAZF1Q86VZ6 243 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 CDRT4Q8N9R6 151 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 ZSCAN4Q8NAM6 433 aaPredicted RBP13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 SLC30A7Q8NEW0 376 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 HIST1H2BAQ96A08 127 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 CHMP1AQ9HD42 196 aaPredicted RBP13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 DUSP22Q9NRW4 184 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 PRR13Q9NZ81 148 aa13.38□□□□□ -0.27
AC005840.4-201ENST00000541242 A0A1W2PQF6 199 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 PMS2P1A4D2B8 440 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 SLC17A2O00624 439 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 ADH6P28332 368 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 CD1CP29017 333 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 NNATQ16517 81 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 CDNFQ49AH0 187 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 FIP1L1Q6UN15 594 aaKnown RBP13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 DGAT2L6Q6ZPD8 337 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 OR5T3Q8NGG3 340 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 GAL3ST3Q96A11 431 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 LRFN5Q96NI6 719 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 ZNF285Q96NJ3 590 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 LMAN2LQ9H0V9 348 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 RNF122Q9H9V4 155 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 MRPS2Q9Y399 296 aaKnown RBP13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 H0YIZ8 118 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 PSMB6P28072 239 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 NTSR1P30989 418 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 SERPINF1P36955 418 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 TNFRSF4P43489 277 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 CENPAP49450 140 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 SRSF5Q13243 272 aaKnown RBP13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 ELOCQ15369 112 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 GLYATL3Q5SZD4 288 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 ULK3Q6PHR2 472 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 CDC20BQ86Y33 519 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 C10orf53Q8N6V4 93 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 FAM131CQ96AQ9 280 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 CDCA3Q99618 268 aaPredicted RBP13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 RNF126Q9BV68 326 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 TRIM2Q9C040 744 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 DAPP1Q9UN19 280 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 DTX4Q9Y2E6 619 aa13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 MRPS18BQ9Y676 258 aaKnown RBP13.37□□□□□ -0.27
AC005840.4-201ENST00000541242 DCDC2BA2VCK2 349 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 H0Y8X5 98 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 RNASEK-C17orf49H0YIS7 233 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 CLN5O75503 358 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 CRHP06850 196 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 ERCC1P07992 297 aaPredicted RBP13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 NQO2P16083 231 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 CD80P33681 288 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 TSFMP43897 325 aaKnown RBP13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 ADAM8P78325 824 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 TSC22D1Q15714 1073 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 C9orf152Q5JTZ5 239 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 ZNF425Q6IV72 752 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 PAPD4Q6PIY7 484 aaKnown RBP13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 TMEM184AQ6ZMB5 413 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 SLC35D2Q76EJ3 337 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 SLC25A42Q86VD7 318 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 ACBD4Q8NC06 268 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 CMBLQ96DG6 245 aa13.36□□□□□ -0.27
AC005840.4-201ENST00000541242 SLC41A2Q96JW4 573 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms