RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 DNAJC15Q9Y5T4 150 aa9.19□□□□□ -0.94
TRERF1-205ENST00000541110 SELENOFO60613 162 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 APEX1P27695 318 aaKnown RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 GTDC1Q4AE62 458 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 SMUG1Q53HV7 270 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 C17orf99Q6UX52 265 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 MDGA2Q7Z553 956 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 PHF7Q9BWX1 381 aaPredicted RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 IGSF5Q9NSI5 407 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 ZNF487B1APH4 448 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 WDR1O75083 606 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 CEBPDP49716 269 aaPredicted RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 BAMBIQ13145 260 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 RPL22L1Q6P5R6 122 aaKnown RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 RFPL4BQ6ZWI9 263 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 HIST2H3AQ71DI3 136 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 OR52H1Q8NGJ2 320 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 GPR119Q8TDV5 335 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 TUBB1Q9H4B7 451 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 TPPP2P59282 170 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 HSF1Q00613 529 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 CPZQ66K79 652 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 PM20D1Q6GTS8 502 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 ZNF300Q96RE9 604 aaPredicted RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 SAGE1Q9NXZ1 904 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 SCN1AP35498 2009 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 TRBV4-1A0A0J9YWV2 114 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 UPK1BO75841 260 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 SNRPBP14678 240 aaKnown RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 DEFA6Q01524 100 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 ACOT6Q3I5F7 207 aaPredicted RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 SLCO2A1Q92959 643 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 TCEAL7Q9BRU2 100 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 SIAEQ9HAT2 523 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 TMEM59LQ9UK28 342 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 RNASE1P07998 156 aaKnown RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 ELK1P19419 428 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 PDZD11Q5EBL8 140 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 HENMT1Q5T8I9 393 aaKnown RBP9.18□□□□□ -0.94
TRERF1-205ENST00000541110 H3F3CQ6NXT2 135 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 CHCHD4Q8N4Q1 142 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 CEPT1Q9Y6K0 416 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 SLCO1B1Q9Y6L6 691 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 MRC1P22897 1456 aa9.18□□□□□ -0.94
TRERF1-205ENST00000541110 ARHGAP33O14559 1287 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 T-ENOLP0DO92 83 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 APOBEC1P41238 236 aaKnown RBP9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ID4P47928 161 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 CDK5Q00535 292 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ZNF90Q03938 601 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 CORO6Q6QEF8 472 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 GTF2H5Q6ZYL4 71 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 TMEM135Q86UB9 458 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 RNF113BQ8IZP6 322 aaKnown RBP9.17□□□□□ -0.94
TRERF1-205ENST00000541110 TAAR6Q96RI8 345 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 MOB1AQ9H8S9 216 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 TAF9BQ9HBM6 251 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ZNF230Q9UIE0 474 aaPredicted RBP9.17□□□□□ -0.94
TRERF1-205ENST00000541110 RAB22AQ9UL26 194 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 SDCBPO00560 298 aaPredicted RBP9.17□□□□□ -0.94
TRERF1-205ENST00000541110 HRO43593 1189 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 NRASP01111 189 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 HOXD9P28356 352 aaPredicted RBP9.17□□□□□ -0.94
TRERF1-205ENST00000541110 OPRK1P41145 380 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 HTR6P50406 440 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 SMAD4Q13485 552 aaKnown RBP9.17□□□□□ -0.94
TRERF1-205ENST00000541110 KEAP1Q14145 624 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 SOHLH1Q5JUK2 328 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 TGIF2LXQ8IUE1 241 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 UBALD2Q8IYN6 164 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 RPEQ96AT9 228 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 LOC100289279A0A1B0GTE1 492 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 M0QZQ0 153 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ST8SIA5O15466 376 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 FABP7O15540 132 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ALKBH1Q13686 389 aaKnown RBP9.17□□□□□ -0.94
TRERF1-205ENST00000541110 AVPI1Q5T686 147 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 LRRTM1Q86UE6 522 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 PFN4Q8NHR9 129 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 TMEM106AQ96A25 262 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 POM121L2Q96KW2 1035 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 PLA2G12AQ9BZM1 189 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 MUTYHQ9UIF7 546 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 OSGIN1Q9UJX0 560 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 CYC1P08574 325 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 PSMB2P49721 201 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 RBP2P50120 134 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ASCL1P50553 236 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 DLX5P56178 289 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ZNF85Q03923 595 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 CMBLQ96DG6 245 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ZNF346Q9UL40 294 aaKnown RBP9.17□□□□□ -0.94
TRERF1-205ENST00000541110 TIMM10BQ9Y5J6 103 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 SPAG17Q6Q759 2223 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 OR2T7P0C7T2 308 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 MYF6P23409 242 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 GPM6AP51674 278 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 C1orf140Q5VVS0 124 aa9.17□□□□□ -0.94
TRERF1-205ENST00000541110 ACSM6Q6P461 480 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms