RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 DPP10Q8N608 796 aa22.51■■□□□ 1.19
CHFR-218ENST00000540963 NSMAFQ92636 917 aa22.51■■□□□ 1.19
CHFR-218ENST00000540963 POLR2J2Q9GZM3 115 aaKnown RBP22.51■■□□□ 1.19
CHFR-218ENST00000540963 POLR2J3Q9H1A7 115 aaKnown RBP22.51■■□□□ 1.19
CHFR-218ENST00000540963 PRDM13Q9H4Q3 707 aa22.51■■□□□ 1.19
CHFR-218ENST00000540963 VIPAS39Q9H9C1 493 aa22.51■■□□□ 1.19
CHFR-218ENST00000540963 PPP1R3CQ9UQK1 317 aa22.51■■□□□ 1.19
CHFR-218ENST00000540963 EDF1O60869 148 aaKnown RBP22.5■■□□□ 1.19
CHFR-218ENST00000540963 COX5BP10606 129 aa22.5■■□□□ 1.19
CHFR-218ENST00000540963 KITLGP21583 273 aa22.5■■□□□ 1.19
CHFR-218ENST00000540963 FMODQ06828 376 aa22.5■■□□□ 1.19
CHFR-218ENST00000540963 INTS11Q5TA45 600 aaKnown RBP22.5■■□□□ 1.19
CHFR-218ENST00000540963 FOXL2NBQ6ZUU3 175 aa22.5■■□□□ 1.19
CHFR-218ENST00000540963 SLC26A7Q8TE54 656 aa22.5■■□□□ 1.19
CHFR-218ENST00000540963 SGTBQ96EQ0 304 aa22.5■■□□□ 1.19
CHFR-218ENST00000540963 RBP7Q96R05 134 aa22.5■■□□□ 1.19
CHFR-218ENST00000540963 NOTCH1P46531 2555 aa22.5■■□□□ 1.19
CHFR-218ENST00000540963 WNT2P09544 360 aa22.49■■□□□ 1.19
CHFR-218ENST00000540963 IGHV4-38-2P0DP08 117 aa22.49■■□□□ 1.19
CHFR-218ENST00000540963 LAP3P28838 519 aa22.49■■□□□ 1.19
CHFR-218ENST00000540963 SPATC1Q76KD6 591 aa22.49■■□□□ 1.19
CHFR-218ENST00000540963 OR2Z1Q8NG97 314 aa22.49■■□□□ 1.19
CHFR-218ENST00000540963 TAMM41Q96BW9 452 aa22.49■■□□□ 1.19
CHFR-218ENST00000540963 SSBP3Q9BWW4 388 aaPredicted RBP22.49■■□□□ 1.19
CHFR-218ENST00000540963 PRKDCP78527 4128 aaKnown RBP22.49■■□□□ 1.19
CHFR-218ENST00000540963 CEACAM18A8MTB9 384 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 TMEM178BH3BS89 294 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 KNG1P01042 644 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 PCGF2P35227 344 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 GZMMP51124 257 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 MTPNP58546 118 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 FAM205BPQ63HN1 556 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 DHDDSQ86SQ9 333 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 MOSPD2Q8NHP6 518 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 PFN4Q8NHR9 129 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 WFDC12Q8WWY7 111 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 COG8Q96MW5 612 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 CGREF1Q99674 301 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 RABEP2Q9H5N1 569 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 BEX1Q9HBH7 125 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 WNK1Q9H4A3 2382 aa22.48■■□□□ 1.19
CHFR-218ENST00000540963 HTR3EA5X5Y0 456 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 C12orf71A8MTZ7 269 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 FBP2O00757 339 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 FSTL3O95633 263 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 ABHD16AO95870 558 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 CRYBA2P53672 197 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 BPIFB3P59826 476 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 ZNF774Q6NX45 483 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 Q6ZR03 302 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 OR4F5Q8NH21 305 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 TMEM239Q8WW34 195 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 KAT8Q9H7Z6 458 aaKnown RBP22.47■■□□□ 1.19
CHFR-218ENST00000540963 C20orf141Q9NUB4 165 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 HIF3AQ9Y2N7 669 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 NDUFAF1Q9Y375 327 aa22.47■■□□□ 1.19
CHFR-218ENST00000540963 IGHV2-70DA0A0C4DH43 119 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 GPANK1O95872 356 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 C17orf107Q6ZR85 190 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 CCDC80Q76M96 950 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 NKAIN4Q8IVV8 208 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 TMEM255BQ8WV15 326 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 ITLN1Q8WWA0 313 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 RAB40AQ8WXH6 277 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 DACT3Q96B18 629 aaPredicted RBP22.46■■□□□ 1.19
CHFR-218ENST00000540963 HAVCR1Q96D42 359 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 PLEKHA8Q96JA3 519 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 ARMCX1Q9P291 453 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 MIOXQ9UGB7 285 aa22.46■■□□□ 1.19
CHFR-218ENST00000540963 OR5F1O95221 314 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 THRBP10828 461 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 MSR1P21757 451 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 RPL27P61353 136 aaKnown RBP22.45■■□□□ 1.18
CHFR-218ENST00000540963 HNRNPA0Q13151 305 aaKnown RBP22.45■■□□□ 1.18
CHFR-218ENST00000540963 LAPTM4AQ15012 233 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 ALG10Q5BKT4 473 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 SLC27A4Q6P1M0 643 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 OR2V2Q96R30 315 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 GCM1Q9NP62 436 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 MED31Q9Y3C7 131 aa22.45■■□□□ 1.18
CHFR-218ENST00000540963 TRAV40A0A0B4J280 105 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 SRRM5B3KS81 715 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 HOXA3O43365 443 aaPredicted RBP22.44■■□□□ 1.18
CHFR-218ENST00000540963 OMGP23515 440 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 MMP16P51512 607 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 TAS2R41P59536 307 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 GNB2P62879 340 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 ENDOGQ14249 297 aaKnown RBP22.44■■□□□ 1.18
CHFR-218ENST00000540963 CGB2Q6NT52 195 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 TAF15Q92804 592 aaKnown RBP eCLIP22.44■■□□□ 1.18
CHFR-218ENST00000540963 CITED1Q99966 193 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 MMP27Q9H306 513 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 RIMS3Q9UJD0 308 aa22.44■■□□□ 1.18
CHFR-218ENST00000540963 NDUFA7O95182 113 aa22.43■■□□□ 1.18
CHFR-218ENST00000540963 CRYBA1P05813 215 aa22.43■■□□□ 1.18
CHFR-218ENST00000540963 RPS2P15880 293 aaKnown RBP22.43■■□□□ 1.18
CHFR-218ENST00000540963 KLBQ86Z14 1044 aa22.43■■□□□ 1.18
CHFR-218ENST00000540963 POU5F2Q8N7G0 328 aa22.43■■□□□ 1.18
CHFR-218ENST00000540963 TSPEARQ8WU66 669 aa22.43■■□□□ 1.18
CHFR-218ENST00000540963 CMBLQ96DG6 245 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms