RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 HOXB4P17483 251 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-212ENST00000540230 NOS3P29474 1203 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 CENPAP49450 140 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 DSCR9P59020 149 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 PCBD1P61457 104 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBE3B-212ENST00000540230 AQP6Q13520 282 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 CARTPTQ16568 116 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 ZNF362Q5T0B9 420 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-212ENST00000540230 VASH1Q7L8A9 365 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-212ENST00000540230 HS3ST5Q8IZT8 346 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 CYB561A3Q8NBI2 242 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 NPEPL1Q8NDH3 523 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 OR4Q3Q8NH05 313 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 ZNRF4Q8WWF5 429 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 SLC7A6Q92536 515 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 GTF3AQ92664 365 aaKnown RBP12.91□□□□□ -0.34
UBE3B-212ENST00000540230 SLCO4A1Q96BD0 722 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 SNX18Q96RF0 628 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 DDOQ99489 341 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 DGCR6LQ9BY27 220 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 BCL2L14Q9BZR8 327 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 LRMDAQ9H2I8 198 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 ARMC1Q9NVT9 282 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 REV1Q9UBZ9 1251 aa12.91□□□□□ -0.34
UBE3B-212ENST00000540230 A0A1W2PPW3 197 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 VWC2LB2RUY7 222 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 LYNX1G3V0Z9 82 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 RER1O15258 196 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 SGCEO43556 437 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 RENP00797 406 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 TFP02787 698 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 LYNX1P0DP58 116 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 NAT2P11245 290 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 CRABP1P29762 137 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 MPV17P39210 176 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 RAD52P43351 418 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 HTR5AP47898 357 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 PDLIM4P50479 330 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 LSM6P62312 80 aaKnown RBP12.9□□□□□ -0.34
UBE3B-212ENST00000540230 GLO1Q04760 184 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 SCRN3Q0VDG4 424 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 KCNMB1Q16558 191 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 CCDC92Q53HC0 331 aaPredicted RBP12.9□□□□□ -0.34
UBE3B-212ENST00000540230 ALDH16A1Q8IZ83 802 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 OR52L1Q8NGH7 329 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 SYNPRQ8TBG9 265 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 SLC25A40Q8TBP6 338 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 POP5Q969H6 163 aaKnown RBP12.9□□□□□ -0.34
UBE3B-212ENST00000540230 TSSK6Q9BXA6 273 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 RACGAP1Q9H0H5 632 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 POFUT1Q9H488 388 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 TBC1D23Q9NUY8 699 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 PLEK2Q9NYT0 353 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 TAAR3PQ9P1P4 343 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.34
UBE3B-212ENST00000540230 IDH3BO43837 385 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 NCR1O76036 304 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 HPXP02790 462 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 CSF3P09919 207 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 DAOP14920 347 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 SLC25A16P16260 332 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 KLF3P57682 345 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-212ENST00000540230 RPL13AP3Q6NVV1 102 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 DNM1P34Q6PK57 102 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 CORO6Q6QEF8 472 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 LYPD4Q6UWN0 246 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 ZBTB46Q86UZ6 589 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 SLC26A10Q8NG04 563 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 ABHD4Q8TB40 342 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 IPCEF1Q8WWN9 437 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-212ENST00000540230 NEU4Q8WWR8 484 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-212ENST00000540230 MARS2Q96GW9 593 aaKnown RBP12.89□□□□□ -0.35
UBE3B-212ENST00000540230 FEVQ99581 238 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 OR2J1Q9GZK6 312 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 FBXO9Q9UK97 447 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-212ENST00000540230 CUBNO60494 3623 aa12.89□□□□□ -0.35
UBE3B-212ENST00000540230 HIVEP2P31629 2446 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 INAFM1C9JVW0 142 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 ICMTO60725 284 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 FKBP6O75344 327 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 DBHP09172 617 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 COX5BP10606 129 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 PYCR1P32322 319 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 MAGEB1P43366 347 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 CBX1P83916 185 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 NKPD1Q17RQ9 610 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 ELFN2Q5R3F8 820 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 LINC00346Q8IVM7 164 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 SLC37A3Q8NCC5 494 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 PAPD5Q8NDF8 572 aaKnown RBP12.88□□□□□ -0.35
UBE3B-212ENST00000540230 GIPC3Q8TF64 312 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 C4orf45Q96LM5 186 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 WACQ9BTA9 647 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 MRPL22Q9NWU5 206 aaKnown RBP12.88□□□□□ -0.35
UBE3B-212ENST00000540230 NDRG4Q9ULP0 352 aaKnown RBP12.88□□□□□ -0.35
UBE3B-212ENST00000540230 POLR1DQ9Y2S0 133 aa12.88□□□□□ -0.35
UBE3B-212ENST00000540230 NAV3Q8IVL0 2385 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms