RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ITLN1Q8WWA0 313 aa16.74■□□□□ 0.27
LPCAT3-210ENST00000540090 RBP7Q96R05 134 aa16.74■□□□□ 0.27
LPCAT3-210ENST00000540090 CGREF1Q99674 301 aa16.74■□□□□ 0.27
LPCAT3-210ENST00000540090 KAT8Q9H7Z6 458 aaKnown RBP16.74■□□□□ 0.27
LPCAT3-210ENST00000540090 PPP1R3CQ9UQK1 317 aa16.74■□□□□ 0.27
LPCAT3-210ENST00000540090 LRCH1Q9Y2L9 728 aa16.74■□□□□ 0.27
LPCAT3-210ENST00000540090 CEACAM18A8MTB9 384 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 TMEM178BH3BS89 294 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 GSTM3P21266 225 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 PCGF2P35227 344 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 GUCA1AP43080 201 aaPredicted RBP16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 CRYBA2P53672 197 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 INTS11Q5TA45 600 aaKnown RBP16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 SPATC1Q76KD6 591 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 DHDDSQ86SQ9 333 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 MUC20Q8N307 709 aaPredicted RBP16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 FNDC8Q8TC99 324 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 TMEM239Q8WW34 195 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 RASSF5Q8WWW0 418 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 POFUT1Q9H488 388 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 PRDM13Q9H4Q3 707 aa16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 NDRG4Q9ULP0 352 aaKnown RBP16.73■□□□□ 0.27
LPCAT3-210ENST00000540090 NOTCH1P46531 2555 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 SURF4O15260 269 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 ABHD16AO95870 558 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 COX5BP10606 129 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 SRSF4Q08170 494 aaKnown RBP16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 ENDOGQ14249 297 aaKnown RBP16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 ALG10Q5BKT4 473 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 ZNF362Q5T0B9 420 aaPredicted RBP16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 BTNL3Q6UXE8 466 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 CCDC80Q76M96 950 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 CLDN22Q8N7P3 220 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 NPEPL1Q8NDH3 523 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 RAB40AQ8WXH6 277 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 DACT3Q96B18 629 aaPredicted RBP16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 TLCD1Q96CP7 247 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 HAVCR1Q96D42 359 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 CMBLQ96DG6 245 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 SSBP3Q9BWW4 388 aaPredicted RBP16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 GCM1Q9NP62 436 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 PDP1Q9P0J1 537 aaPredicted RBP16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 RIMS3Q9UJD0 308 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 NDUFAF1Q9Y375 327 aa16.72■□□□□ 0.27
LPCAT3-210ENST00000540090 WNK1Q9H4A3 2382 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 HOXA3O43365 443 aaPredicted RBP16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 OR5F1O95221 314 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 KNG1P01042 644 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 TAS2R41P59536 307 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 RPL27P61353 136 aaKnown RBP16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 POU5F2Q8N7G0 328 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 OR10A6Q8NH74 314 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 WFDC12Q8WWY7 111 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 THOC1Q96FV9 657 aaKnown RBP16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 OR2V2Q96R30 315 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 WACQ9BTA9 647 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 POLR2J2Q9GZM3 115 aaKnown RBP16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 POLR2J3Q9H1A7 115 aaKnown RBP16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 RABEP2Q9H5N1 569 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 TMEM165Q9HC07 324 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 HIF3AQ9Y2N7 669 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 SH3GLB1Q9Y371 365 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 MED31Q9Y3C7 131 aa16.71■□□□□ 0.27
LPCAT3-210ENST00000540090 IGHV2-70DA0A0C4DH43 119 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 MDFIC2A0A1B0GVS7 189 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 C12orf71A8MTZ7 269 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 IFNL4K9M1U5 179 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 SCG5P05408 212 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 MSR1P21757 451 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 GZMMP51124 257 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 TOP3AQ13472 1001 aaPredicted RBP16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 PIN1Q13526 163 aaPredicted RBP16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 KIR3DL3Q8N743 410 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 BEX1Q9HBH7 125 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 STARD10Q9Y365 291 aa16.7■□□□□ 0.26
LPCAT3-210ENST00000540090 TRAV40A0A0B4J280 105 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 KIR2DS1A0A191URI9 304 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 A0A1W2PPL8 197 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 FAM181BA6NEQ2 426 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 THRBP10828 461 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 MMP16P51512 607 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 VMACQ2NL98 169 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 DEFB112Q30KQ8 113 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 C17orf107Q6ZR85 190 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 KLBQ86Z14 1044 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 LRRC75AQ8NAA5 344 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 OR10S1Q8NGN2 331 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 OR4F5Q8NH21 305 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 PTP4A1Q93096 173 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 POLE4Q9NR33 117 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 ARMCX1Q9P291 453 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 MIOXQ9UGB7 285 aa16.69■□□□□ 0.26
LPCAT3-210ENST00000540090 SRRM5B3KS81 715 aa16.68■□□□□ 0.26
LPCAT3-210ENST00000540090 RPS2P15880 293 aaKnown RBP16.68■□□□□ 0.26
LPCAT3-210ENST00000540090 TNFRSF1BP20333 461 aa16.68■□□□□ 0.26
LPCAT3-210ENST00000540090 CTXN1P60606 82 aa16.68■□□□□ 0.26
LPCAT3-210ENST00000540090 GNB2P62879 340 aa16.68■□□□□ 0.26
LPCAT3-210ENST00000540090 FAM205BPQ63HN1 556 aa16.68■□□□□ 0.26
LPCAT3-210ENST00000540090 SLC27A4Q6P1M0 643 aa16.68■□□□□ 0.26
LPCAT3-210ENST00000540090 ZDHHC16Q969W1 377 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms