RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 FOXL2NBQ6ZUU3 175 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 VTCN1Q7Z7D3 282 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 KLHL36Q8N4N3 616 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 SEMA6DQ8NFY4 1073 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 OR13C2Q8NGS9 318 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 GTF3AQ92664 365 aaKnown RBP12.99□□□□□ -0.33
UBE3B-211ENST00000539843 C7orf69Q9H7B7 122 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 TBCCD1Q9NVR7 557 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 PLEK2Q9NYT0 353 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 RPS6KA6Q9UK32 745 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 POLR1DQ9Y2S0 133 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 SVEP1Q4LDE5 3571 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 ZSCAN5BA6NJL1 495 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 DEAF1O75398 565 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-211ENST00000539843 RGS9O75916 674 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-211ENST00000539843 UBOX5O94941 541 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 AQP6Q13520 282 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 ZBED5Q49AG3 693 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 GPR139Q6DWJ6 353 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 DNM1P34Q6PK57 102 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 CLDN22Q8N7P3 220 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 C3orf56Q8N813 242 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 LRRC75AQ8NAA5 344 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 FAM156AQ8NDB6 213 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 FAM216AQ8WUB2 273 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 HSH2DQ96JZ2 352 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 EFCAB1Q9HAE3 211 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 NTN4Q9HB63 628 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 MSL2Q9HCI7 577 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 NPTNQ9Y639 398 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 CACNG2Q9Y698 323 aa12.98□□□□□ -0.33
UBE3B-211ENST00000539843 PRSS37A4D1T9 235 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 H7C1C5 153 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 J3KTA2 159 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 J3QW42 95 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 NDUFB2O95178 105 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 SERPINA1P01009 418 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 GPR4P46093 362 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 RGS6P49758 472 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 SLC7A2P52569 658 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 LCN6P62502 163 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 ENDOGQ14249 297 aaKnown RBP12.97□□□□□ -0.33
UBE3B-211ENST00000539843 KRT72Q14CN4 511 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 TMPRSS11FQ6ZWK6 438 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 CBLL1Q75N03 491 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 ZNF771Q7L3S4 317 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-211ENST00000539843 ADCK1Q86TW2 530 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 POU5F2Q8N7G0 328 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 OR2Z1Q8NG97 314 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 OR5L1Q8NGL2 311 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 SAMD8Q96LT4 415 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 DCLRE1CQ96SD1 692 aaKnown RBP12.97□□□□□ -0.33
UBE3B-211ENST00000539843 KCTD14Q9BQ13 255 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-211ENST00000539843 TMPRSS13Q9BYE2 586 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 RERGLQ9H628 205 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 EMC7Q9NPA0 242 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 DDX28Q9NUL7 540 aaKnown RBP12.97□□□□□ -0.33
UBE3B-211ENST00000539843 TMEM106BQ9NUM4 274 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 CMTM6Q9NX76 183 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 ARMCX1Q9P291 453 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 AURKCQ9UQB9 309 aa12.97□□□□□ -0.33
UBE3B-211ENST00000539843 PPIAL4EA0A075B759 164 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 A0A087WUU8 490 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 PPIAL4CA0A0B4J2A2 164 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 TEX13CA0A0J9YWL9 993 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 PPIAL4DF5H284 164 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 IFNL4K9M1U5 179 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 KHDRBS3O75525 346 aaKnown RBP12.96□□□□□ -0.33
UBE3B-211ENST00000539843 NGFP01138 241 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 H1F0P07305 194 aaKnown RBP12.96□□□□□ -0.33
UBE3B-211ENST00000539843 SBK2P0C263 348 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 PPIAL4FP0DN26 164 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 COX4I1P13073 169 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 RPS6KA3P51812 740 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 LCN2P80188 198 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 GUCY1A3Q02108 690 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 KRR1Q13601 381 aaKnown RBP12.96□□□□□ -0.33
UBE3B-211ENST00000539843 ARMCX4Q5H9R4 360 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 FGD3Q5JSP0 725 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 SLC27A4Q6P1M0 643 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 C1orf94Q6P1W5 598 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 PGM2L1Q6PCE3 622 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 MUC20Q8N307 709 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-211ENST00000539843 PURGQ9UJV8 347 aaKnown RBP12.96□□□□□ -0.33
UBE3B-211ENST00000539843 ADAM18Q9Y3Q7 739 aa12.96□□□□□ -0.33
UBE3B-211ENST00000539843 SLC16A7O60669 478 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 SASH3O75995 380 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 ADRA2CP18825 462 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 KITLGP21583 273 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 CFPP27918 469 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 SDHAP31040 664 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 CENPAP49450 140 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 NUDT2P50583 147 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 LSM6P62312 80 aaKnown RBP12.95□□□□□ -0.34
UBE3B-211ENST00000539843 PSG7Q13046 419 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 CDK5R2Q13319 367 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 TMEM155Q4W5P6 130 aa12.95□□□□□ -0.34
UBE3B-211ENST00000539843 VASH1Q7L8A9 365 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-211ENST00000539843 GLB1L2Q8IW92 636 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms