RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RICTORQ6R327 1708 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CTAGE15A4D2H0 777 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 A8MXK9 166 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 HSBP1L1C9JCN9 74 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 K7ERQ8 282 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RS1O15537 224 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SYNGR1O43759 233 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ACTL6AO96019 429 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 P04436 131 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SNRPAP09012 282 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 STAG3L3P0CL85 134 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 POLR2EP19388 210 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 TEAD1P28347 426 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CFHR2P36980 270 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 KIR3DL2P43630 455 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ATP5J2P56134 94 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PAX5Q02548 391 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SELENBP1Q13228 472 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SLAQ13239 276 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OR5I1Q13606 314 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 IRF4Q15306 451 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SGCAQ16586 387 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 LRRC26Q2I0M4 334 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF630Q2M218 657 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 HSP90AA4PQ58FG1 418 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SPANXN2Q5MJ10 180 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CCNJQ5T5M9 372 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PDPK2PQ6A1A2 396 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CCDC137Q6PK04 289 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 BLOC1S2Q6QNY1 142 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ABHD12BQ7Z5M8 362 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CTAGE6Q86UF2 777 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 FAM228AQ86W67 206 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 UBALD2Q8IYN6 164 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 FAM71AQ8IYT1 594 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ST13P4Q8IZP2 240 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 DAW1Q8N136 415 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 GABRG1Q8N1C3 465 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 STK40Q8N2I9 435 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MTURNQ8N3F0 131 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 FBXL16Q8N461 479 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OR7G1Q8NGA0 311 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OR56B4Q8NH76 319 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CLHC1Q8NHS4 586 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ANGPTL6Q8NI99 470 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PIK3IP1Q96FE7 263 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF488Q96MN9 340 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RPRD1AQ96P16 312 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CSPG4P5Q96PW8 444 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 EPYCQ99645 322 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SPIN2AQ99865 258 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SPIN2BQ9BPZ2 258 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MRPL45Q9BRJ2 306 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OSBPL10Q9BXB5 764 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 NMUR2Q9GZQ4 415 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 DEFB129Q9H1M3 183 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 DEFB127Q9H1M4 99 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 LHX5Q9H2C1 402 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 NXF3Q9H4D5 531 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 REEP4Q9H6H4 257 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 POLE4Q9NR33 117 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 IL17CQ9P0M4 197 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 GCNT4Q9P109 453 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OR1A1Q9P1Q5 309 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MTCH2Q9Y6C9 303 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 DICER1Q9UPY3 1922 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ZFYVE9O95405 1425 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 NUP160Q12769 1436 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ERBINQ96RT1 1412 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 DEPDC5O75140 1603 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ANKRD26Q9UPS8 1709 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MARF1Q9Y4F3 1742 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ITGB4P16144 1822 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 BAHCC1Q9P281 2608 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PSMB11A5LHX3 300 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 C5orf63A6NC05 138 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 GOLGA8OA6NCC3 632 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 A8MX80 341 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 A8MXQ7 604 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 GOLGA8NF8WBI6 632 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 K7N7A8 449 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 BPY2O14599 106 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 HSD17B6O14756 317 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SOCS1O15524 211 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ERI3O43414 337 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PRKYO43930 277 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF354AO60765 605 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 TBL1XO60907 577 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 EIF3GO75821 320 aaKnown RBP eCLIP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CDK14O94921 469 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 DIRAS1O95057 198 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 FOLR1P15328 257 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 IGFBP3P17936 291 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CALML3P27482 149 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 AQP1P29972 269 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PFN2P35080 140 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RBMXP38159 391 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 LEPP41159 167 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PRKXP51817 358 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MAGOHP61326 146 aaKnown RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms