RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 STPG1Q5TH74 334 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 ZNF704Q6ZNC4 412 aaPredicted RBP13.15□□□□□ -0.3
ATL3-203ENST00000538786 ESPNLQ6ZVH7 1005 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 RHOUQ7L0Q8 258 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 GGNQ86UU5 652 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 IL22RA1Q8N6P7 574 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 DTX3Q8N9I9 347 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 DEFB124Q8NES8 71 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 OR2AJ1Q8NGZ0 328 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 RFT1Q96AA3 541 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 SFXN2Q96NB2 322 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
ATL3-203ENST00000538786 OR2M2Q96R28 347 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 FAM173AQ9BQD7 235 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 UTP23Q9BRU9 249 aaKnown RBP13.15□□□□□ -0.3
ATL3-203ENST00000538786 THAP7Q9BT49 309 aaPredicted RBP13.15□□□□□ -0.3
ATL3-203ENST00000538786 SRXN1Q9BYN0 137 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 EMC7Q9NPA0 242 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 GLTPQ9NZD2 209 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 RABL2AQ9UBK7 228 aaPredicted RBP13.15□□□□□ -0.3
ATL3-203ENST00000538786 GDF2Q9UK05 429 aaPredicted RBP13.15□□□□□ -0.3
ATL3-203ENST00000538786 RABL2BQ9UNT1 228 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 POLR1DQ9Y2S0 133 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 LHFPL6Q9Y693 200 aa13.15□□□□□ -0.3
ATL3-203ENST00000538786 PRR33A8MZF0 331 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.14□□□□□ -0.31
ATL3-203ENST00000538786 H0YC42 278 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 H3BSH0 61 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 EIF1AYO14602 144 aaKnown RBP13.14□□□□□ -0.31
ATL3-203ENST00000538786 TRAPPC6AO75865 159 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 CD2P06729 351 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 ACHEP22303 614 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 ENPP1P22413 925 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 GDF1P27539 372 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 CDAP32320 146 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 MAP2K3P46734 347 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 CSNK1A1P48729 337 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 CLDN20P56880 219 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 WIPI1Q5MNZ9 446 aaPredicted RBP13.14□□□□□ -0.31
ATL3-203ENST00000538786 MZT2BQ6NZ67 158 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 TMPRSS12Q86WS5 348 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 TMEM123Q8N131 208 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 OR10S1Q8NGN2 331 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 ASB5Q8WWX0 329 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 TMEM54Q969K7 222 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 FER1L6-AS2Q96M78 137 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 HDHD2Q9H0R4 259 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 FAM206AQ9NX38 181 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 HHLA2Q9UM44 414 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 CAMK2AQ9UQM7 478 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 ETV7Q9Y603 341 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 EML6Q6ZMW3 1958 aa13.14□□□□□ -0.31
ATL3-203ENST00000538786 SMAD9O15198 467 aaKnown RBP13.13□□□□□ -0.31
ATL3-203ENST00000538786 FTH1P19P0C7X4 201 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 CD82P27701 267 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 CFPP27918 469 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 EIF1AXP47813 144 aaKnown RBP13.13□□□□□ -0.31
ATL3-203ENST00000538786 ZNF133P52736 654 aaPredicted RBP13.13□□□□□ -0.31
ATL3-203ENST00000538786 SCAND1P57086 179 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 CARD18P57730 90 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 C10orf128Q5T292 105 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 BCL2L15Q5TBC7 163 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 TMEM244Q5VVB8 128 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 HACD4Q5VWC8 232 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 KLHL24Q6TFL4 600 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 CFAP77Q6ZQR2 320 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 CMTM4Q8IZR5 234 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 CLEC1AQ8NC01 280 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 OR6N1Q8NGY5 312 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 ENKURQ8TC29 256 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 CHAC2Q8WUX2 184 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 TRIM63Q969Q1 353 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 INTS12Q96CB8 462 aaKnown RBP13.13□□□□□ -0.31
ATL3-203ENST00000538786 SLC25A38Q96DW6 304 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 ZC3HAV1LQ96H79 300 aaKnown RBP13.13□□□□□ -0.31
ATL3-203ENST00000538786 SIGLEC12Q96PQ1 595 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 RBFOX1Q9NWB1 397 aaKnown RBP13.13□□□□□ -0.31
ATL3-203ENST00000538786 OR5V1Q9UGF6 321 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 TTLL8A6PVC2 850 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 LYRM1O43325 122 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 UBCP0CG48 685 aaKnown RBP13.13□□□□□ -0.31
ATL3-203ENST00000538786 FSTP19883 344 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 MMP15P51511 669 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 SUCLG1P53597 346 aaKnown RBP13.13□□□□□ -0.31
ATL3-203ENST00000538786 CLDN12P56749 244 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 GABREP78334 506 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 FCRLAQ7L513 359 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 UBE2J2Q8N2K1 259 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 OR2M7Q8NG81 312 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 ADGRG7Q96K78 797 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 ABCG5Q9H222 651 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 NIPAL2Q9H841 368 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 STEAP1Q9UHE8 339 aa13.13□□□□□ -0.31
ATL3-203ENST00000538786 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
ATL3-203ENST00000538786 LOC107986453A0A1B0GWG9 222 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms