RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TMIGD3P0DMS9 266 aaPredicted RBP12.52□□□□□ -0.4
ACTN1-205ENST00000538545 LAP3P28838 519 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 MAP2K6P52564 334 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 KCTD18Q6PI47 426 aaPredicted RBP12.52□□□□□ -0.4
ACTN1-205ENST00000538545 FCRLAQ7L513 359 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 NAA40Q86UY6 237 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 TMPRSS12Q86WS5 348 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 ZIC4Q8N9L1 334 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 OR51A2Q8NGJ7 313 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 OR6N1Q8NGY5 312 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 LIN7BQ9HAP6 207 aa12.52□□□□□ -0.4
ACTN1-205ENST00000538545 RP1L1Q8IWN7 2480 aaPredicted RBP12.52□□□□□ -0.4
ACTN1-205ENST00000538545 PTPRBP23467 1997 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 A0A087WZY1 265 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 ISPDA4D126 451 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 NPIPA2E9PIF3 369 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 NPIPA3F8WFD2 350 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 SLC43A1O75387 559 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 PMS2P2O95744 297 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 SRD5A2P31213 254 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 GALK2Q01415 458 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 TEX30Q5JUR7 227 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 DNM1P34Q6PK57 102 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 RAB43Q86YS6 212 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 ABHD3Q8WU67 409 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 RBM24Q9BX46 236 aaKnown RBP12.52□□□□□ -0.41
ACTN1-205ENST00000538545 SLC6A15Q9H2J7 730 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 FANCFQ9NPI8 374 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 CYB5R1Q9UHQ9 305 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 PIEZO2Q9H5I5 2752 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 H2BFMP0C1H6 154 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 ROM1Q03395 351 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 GFOD2Q3B7J2 385 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 TEX19Q8NA77 164 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 OR2M7Q8NG81 312 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 OR9K2Q8NGE7 335 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 OR6X1Q8NH79 312 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 OR10D3Q8NH80 312 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 GPR148Q8TDV2 347 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 UTP23Q9BRU9 249 aaKnown RBP12.52□□□□□ -0.41
ACTN1-205ENST00000538545 ZFP64Q9NPA5 681 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 CYSLTR2Q9NS75 346 aa12.52□□□□□ -0.41
ACTN1-205ENST00000538545 GDF2Q9UK05 429 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-205ENST00000538545 TMEM212A6NML5 194 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 IFITM5A6NNB3 132 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 EEF1E1O43324 174 aaKnown RBP12.51□□□□□ -0.41
ACTN1-205ENST00000538545 FCER2P06734 321 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 CD3GP09693 182 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 PATE4P0C8F1 98 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 CARD18P57730 90 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 SLC25A47Q6Q0C1 308 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-205ENST00000538545 ALKBH3Q96Q83 286 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-205ENST00000538545 G6PC2Q9NQR9 355 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 ACACAQ13085 2346 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 PRR33A8MZF0 331 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF254O75437 659 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 APC2O95996 2303 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 CAPZA2P47755 286 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 PRSS12P56730 875 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 LRRTM1Q86UE6 522 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 CATSPERDQ86XM0 798 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 CMTM4Q8IZR5 234 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 CLEC1AQ8NC01 280 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 OR2M2Q96R28 347 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF416Q9BWM5 594 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 GLTPQ9NZD2 209 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF319Q9P2F9 582 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 V9GY05 133 aa12.51□□□□□ -0.41
ACTN1-205ENST00000538545 E9PLN8 166 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 PHYHO14832 338 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 SRSF10O75494 262 aaKnown RBP12.5□□□□□ -0.41
ACTN1-205ENST00000538545 WISP2O76076 250 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 POU3F2P20265 443 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-205ENST00000538545 CNR1P21554 472 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF57Q68EA5 555 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-205ENST00000538545 PAMR1Q6UXH9 720 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 LRRC28Q86X40 367 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-205ENST00000538545 ASB5Q8WWX0 329 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 ASB17Q8WXJ9 295 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 HDHD2Q9H0R4 259 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 AUNIPQ9H7T9 357 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 ETAA1Q9NY74 926 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 TAS2R4Q9NYW5 299 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 MRPL15Q9P015 296 aaKnown RBP12.5□□□□□ -0.41
ACTN1-205ENST00000538545 OR52A1Q9UKL2 312 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 NPIPB13A6NJU9 1138 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 NPIPB4C9JG80 1138 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 PTTG1O95997 202 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 CSNK1A1P48729 337 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 BLVRAP53004 296 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 RAB25P57735 213 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 DEFA1P59665 94 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 DEFA3P59666 94 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 DGCR2P98153 550 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 SCN1BQ07699 218 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 TRIQKQ629K1 86 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 RNF144BQ7Z419 303 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms