RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 IGHV2-70DA0A0C4DH43 119 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 A0A1W2PPL8 197 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 M0QZ24 198 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 ICMTO60725 284 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 MT-ND1P03886 318 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 THRBP10828 461 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 MMP16P51512 607 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 MTPNP58546 118 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 GNB2P62879 340 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 PAX2Q02962 417 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 SLC25A47Q6Q0C1 308 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 ARL9Q6T311 187 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 FIP1L1Q6UN15 594 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 LRRN1Q6UXK5 716 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 C1QL4Q86Z23 238 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 MUC20Q8N307 709 aaPredicted RBP11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 OR10S1Q8NGN2 331 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 TMEM255BQ8WV15 326 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 TAMM41Q96BW9 452 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 TLCD1Q96CP7 247 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 SGTBQ96EQ0 304 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 OR2V2Q96R30 315 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 CITED1Q99966 193 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 MMP27Q9H306 513 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 MAN2C1Q9NTJ4 1040 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 C20orf141Q9NUB4 165 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 ARMCX1Q9P291 453 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 STX18Q9P2W9 335 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 TIMM10BQ9Y5J6 103 aa11.73□□□□□ -0.53
SMARCA4-206ENST00000538456 A0A1B0GUS0 222 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 SRRM5B3KS81 715 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 TMEM178BH3BS89 294 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 VIMP08670 466 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 CST2P09228 141 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 WNT2P09544 360 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 PPIAL4GP0DN37 164 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 MRPL19P49406 292 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 ERFP50548 548 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 PCBD1P61457 104 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 RELBQ01201 579 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 SELPLGQ14242 412 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 AGKQ53H12 422 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 RUNDC3AQ59EK9 446 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 ZNF362Q5T0B9 420 aaPredicted RBP11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 OLFML2AQ68BL7 652 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 DLEU7Q6UYE1 221 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 KLBQ86Z14 1044 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 NKAIN4Q8IVV8 208 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 POU5F2Q8N7G0 328 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 NPEPL1Q8NDH3 523 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 ZNF420Q8TAQ5 688 aaPredicted RBP11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 SLC26A7Q8TE54 656 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 UBE2FQ969M7 185 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 CMBLQ96DG6 245 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 THOC1Q96FV9 657 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 EBF4Q9BQW3 602 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 CHIAQ9BZP6 476 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 PCDHAC1Q9H158 963 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 NKIRAS1Q9NYS0 192 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
SMARCA4-206ENST00000538456 IGHV3-64DA0A0J9YX35 117 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 GMNCA6NCL1 334 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 SURF4O15260 269 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 CYB5R3P00387 301 aaPredicted RBP11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 NR2C1P13056 603 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 TNFRSF1BP20333 461 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 GUCA1AP43080 201 aaPredicted RBP11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 HTR5AP47898 357 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 TAS2R41P59536 307 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 ENDOGQ14249 297 aaKnown RBP11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 C1orf94Q6P1W5 598 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 RHOUQ7L0Q8 258 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 DHDDSQ86SQ9 333 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 IGFN1Q86VF2 1251 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 OR5AS1Q8N127 324 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 OR10AD1Q8NGE0 317 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 RAB40AQ8WXH6 277 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 RBP7Q96R05 134 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 TXNIPQ9H3M7 391 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 GCM1Q9NP62 436 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 C1RLQ9NZP8 487 aa11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 NDRG4Q9ULP0 352 aaKnown RBP11.71□□□□□ -0.53
SMARCA4-206ENST00000538456 C12orf71A8MTZ7 269 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 TIMM23O14925 209 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 PIP5K1CO60331 668 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 DOK2O60496 412 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 SHOX2O60902 331 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 KITLGP21583 273 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 MSR1P21757 451 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 IDH3AP50213 366 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 KRTAP10-3P60369 221 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 FGF12P61328 243 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 ALG10Q5BKT4 473 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 RUSC1-AS1Q66K80 236 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 SLC27A4Q6P1M0 643 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 ATG16L2Q8NAA4 619 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 TMEM239Q8WW34 195 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 DACT3Q96B18 629 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms