RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 OAFQ86UD1 273 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 SLC15A3Q8IY34 581 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 RNF113BQ8IZP6 322 aaKnown RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 POU5F2Q8N7G0 328 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 C3orf56Q8N813 242 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 DVL3Q92997 716 aaPredicted RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 ZDHHC16Q969W1 377 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 RCN3Q96D15 328 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 CMBLQ96DG6 245 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 Q96M85 177 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 JMJD8Q96S16 334 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 DIRC2Q96SL1 478 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 FNDC11Q9BVV2 318 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 RBM4Q9BWF3 364 aaKnown RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 SUCNR1Q9BXA5 334 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 MMP26Q9NRE1 261 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 TMEM106BQ9NUM4 274 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 TBCCD1Q9NVR7 557 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 CGGBP1Q9UFW8 167 aaPredicted RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 EGFL7Q9UHF1 273 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 PURGQ9UJV8 347 aaKnown RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 ZDHHC8Q9ULC8 765 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 NDRG4Q9ULP0 352 aaKnown RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 STARD10Q9Y365 291 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 ADAM18Q9Y3Q7 739 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 NPTNQ9Y639 398 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 WNK2Q9Y3S1 2297 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 TRAPPC2LH3BP13 241 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 CXCR6O00574 342 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 IMPA2O14732 288 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 SPRY1O43609 319 aaPredicted RBP7.13□□□□□ -1.27
USP28-203ENST00000537490 DOK2O60496 412 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 FOXH1O75593 365 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ABHD16AO95870 558 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 IFNW1P05000 195 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 CD14P08571 375 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 COX5BP10606 129 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 CTLA4P16410 223 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 KITLGP21583 273 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 GATA3P23771 443 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 RPL4P36578 427 aaKnown RBP7.13□□□□□ -1.27
USP28-203ENST00000537490 GPR4P46093 362 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 HTR5AP47898 357 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 LIMS1P48059 325 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 SLC9A3P48764 834 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ERFP50548 548 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 SEC61A1P61619 476 aaKnown RBP7.13□□□□□ -1.27
USP28-203ENST00000537490 LIPEQ05469 1076 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 SCRN3Q0VDG4 424 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ZBED5Q49AG3 693 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 IFI44LQ53G44 452 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 MESTQ5EB52 335 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ARL9Q6T311 187 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ZNF730Q6ZMV8 503 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 TMPRSS11FQ6ZWK6 438 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 MBOAT2Q6ZWT7 520 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 CBLL1Q75N03 491 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 VASH1Q7L8A9 365 aaPredicted RBP7.13□□□□□ -1.27
USP28-203ENST00000537490 FAM122BQ7Z309 247 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 LRRC28Q86X40 367 aaPredicted RBP7.13□□□□□ -1.27
USP28-203ENST00000537490 BPIFB2Q8N4F0 458 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ZNF283Q8N7M2 679 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 DEFB108BQ8NET1 73 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 OR2Z1Q8NG97 314 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ST7LQ8TDW4 575 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ITLN1Q8WWA0 313 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ACOT11Q8WXI4 607 aaPredicted RBP7.13□□□□□ -1.27
USP28-203ENST00000537490 LZICQ8WZA0 190 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 SLC7A6Q92536 515 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 HAVCR1Q96D42 359 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 SAMD8Q96LT4 415 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 WACQ9BTA9 647 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 PATZ1Q9HBE1 687 aaKnown RBP7.13□□□□□ -1.27
USP28-203ENST00000537490 MRGBPQ9NV56 204 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 ARMCX1Q9P291 453 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 GRHPRQ9UBQ7 328 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 PPIAL4AQ9Y536 164 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 CAPN7Q9Y6W3 813 aa7.13□□□□□ -1.27
USP28-203ENST00000537490 PPIAL4EA0A075B759 164 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 PPIAL4CA0A0B4J2A2 164 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 TEX13CA0A0J9YWL9 993 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 PRSS37A4D1T9 235 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 PPIAL4DF5H284 164 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 NME4O00746 187 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 SGCEO43556 437 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 SLC16A7O60669 478 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 PTP4A3O75365 173 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 ZNF682O95780 498 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 SERPINA1P01009 418 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 DBHP09172 617 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 PPIAL4FP0DN26 164 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 ZNF12P17014 697 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 GSTM3P21266 225 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 TUBG1P23258 451 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 FPR2P25090 351 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 SLC6A9P48067 706 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 UBA52P62987 128 aaKnown RBP7.12□□□□□ -1.27
USP28-203ENST00000537490 ZNF154Q13106 437 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 TUSC1Q2TAM9 212 aa7.12□□□□□ -1.27
USP28-203ENST00000537490 CCDC92Q53HC0 331 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms