RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SAGP10523 405 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-207ENST00000536634 MLNP12872 115 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CPMP14384 443 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 RPL35AP18077 110 aaKnown RBP4.31□□□□□ -1.72
CLIP1-207ENST00000536634 PAX7P23759 505 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CPT2P23786 658 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 PIK3R1P27986 724 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 SHC1P29353 583 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 EVI2BP34910 448 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 EMDP50402 254 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 FABP6P51161 128 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 XKP51811 444 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 RAP1GDS1P52306 607 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 GPX6P59796 221 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 KRTAP10-3P60369 221 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 IRF8Q02556 426 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 ACSM1Q08AH1 577 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 TRAP1Q12931 704 aaKnown RBP4.31□□□□□ -1.72
CLIP1-207ENST00000536634 STX5Q13190 355 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 FASTKD3Q14CZ7 662 aaKnown RBP4.31□□□□□ -1.72
CLIP1-207ENST00000536634 OR4D1Q15615 310 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 LTB4RQ15722 352 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 SGCBQ16585 318 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 PDK4Q16654 411 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 TMEM44Q2T9K0 475 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 MOGAT2Q3SYC2 334 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CT45A2Q5DJT8 189 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 LGSNQ5TDP6 509 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 SEL1L2Q5TEA6 688 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 OR52E8Q6IFG1 317 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 C4orf22Q6V702 233 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 RBPMS2Q6ZRY4 209 aaKnown RBP4.31□□□□□ -1.72
CLIP1-207ENST00000536634 GPRIN3Q6ZVF9 776 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 FRA10AC1Q70Z53 315 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 LYG1Q8N1E2 194 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 LRRC17Q8N6Y2 441 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 Q8NBF4 154 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 AQP11Q8NBQ7 271 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 OR52B6Q8NGF0 335 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 OR52R1Q8NGF1 315 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 C11orf45Q8TAV5 145 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 ABHD3Q8WU67 409 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 EFHD2Q96C19 240 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CMTM7Q96FZ5 175 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 FOXN4Q96NZ1 517 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 BTBD9Q96Q07 612 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 DHRS9Q9BPW9 319 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CAPS2Q9BXY5 557 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 METTL17Q9H7H0 456 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-207ENST00000536634 NGBQ9NPG2 151 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 BCAP29Q9UHQ4 241 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 ZNF639Q9UID6 485 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 MOB4Q9Y3A3 225 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 AP4B1Q9Y6B7 739 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 CSMD3Q7Z407 3707 aa4.31□□□□□ -1.72
CLIP1-207ENST00000536634 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 H0YAE9 185 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 TNFSF11O14788 317 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 GMFGO60234 142 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 STK16O75716 305 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 WISP3O95389 354 aaPredicted RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 PGAM1P18669 254 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 DRD5P21918 477 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 FEN1P39748 380 aaKnown RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 PPICP45877 212 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 TAS2R39P59534 338 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 SARNPP82979 210 aaKnown RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 RASGEF1BQ0VAM2 473 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 GANABQ14697 944 aaKnown RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 PPA1Q15181 289 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 CARTPTQ16568 116 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 ZSWIM7Q19AV6 140 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 IQCCQ4KMZ1 466 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 TRMT12Q53H54 448 aaKnown RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 TCTEX1D4Q5JR98 221 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 PAGE2BQ5JRK9 111 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 HIST2H2AA3Q6FI13 130 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 FAM45BPQ6NSW5 357 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 MED27Q6P2C8 311 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 TTC27Q6P3X3 843 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 BHLHA15Q7RTS1 189 aaPredicted RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 CCDC91Q7Z6B0 441 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 ADAMTSL2Q86TH1 951 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 TUSC5Q8IXB3 177 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 SYCE1Q8N0S2 351 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 CEP112Q8N8E3 955 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 GBP7Q8N8V2 638 aaPredicted RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 OR4K14Q8NGD5 310 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 FAM45AQ8TCE6 357 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 C2orf48Q96LS8 159 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 LYSTQ99698 3801 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 KLHDC3Q9BQ90 382 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 SRXN1Q9BYN0 137 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 TMEM185BQ9H7F4 350 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 MED20Q9H944 212 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 XAB2Q9HCS7 855 aaKnown RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 FANCFQ9NPI8 374 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 ESM1Q9NQ30 184 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 LYARQ9NX58 379 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms